MXO03537.5prime Sequence
768 bp (768 high quality bases) assembled on 2007-07-18
> MXO03537.5prime
CAGTCGACATGGCATCCGTGCGAGGCAACTCCGTGTACCAGGGCGTCTAC
GGGGCTCTGAGGACCCTGCTCCACCTGACGGCAGTCGTGCAATTTGGCTA
CGGCATCTATTACGACTACAACTACGTGCAGTTCCCCACCAGCGAGCCAG
AGATGAGGATCCATCATCCCTGGGGGGGCAAATTCAAATACCTAACGTTC
CTGGATGCGATAATTCAGGCACTGTACTATATTGTATCGCTGGTCAACGA
TTTCGTGGGCACTAATGAGCTGACACCCAAGAAACCTCCGGCGGTTCGCA
GGTTCAAGGACTGGCTGATGGCTACATTGGCCTTTCCAGTGGCTATCAAT
GTGGGCGTGACCTTCTGGACACTGTACGCTATCGACAGGGAGCTAGTCTT
CCCCAAGGTTCTGGACCCCGTGTTCCCCAGCTGGCTCAACCACGTCCTGC
ACACCAACATAGTGGTTTTCATCATCCTGGAGCTGTTCATCTCGTACAGG
TCGTACCCAAAACGAAGCCAAGGACTCGCAGGACTGGCCATTTTCATGGG
CGCCTACCTGGTTTGGATTCACGTGGTGAAGCACTACTCGGGTGTGTGGG
TGTATCCAGTGCTCGAGGTTCTCCAGCTTCCGCAACGCATCCTGTTTTTT
GCGGCCGTCGTTGGATTCACGCTGTCACTTTACCTGCTGGGCGAGTTCCT
CAACAATACCGTCTGGGCCAAGGAAGTGAAGTTGGCCAAGCGCAAATCCA
ACGCAAGCTTTCTAGACC
MXO03537.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:40:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3625-PB | 747 | CG3625-RB | 1..744 | 9..752 | 3720 | 100 | Plus |
| CG3625-PA | 738 | CG3625-RA | 189..735 | 206..752 | 2735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3625-RB | 1341 | CG3625-RB | 94..837 | 9..752 | 3720 | 100 | Plus |
| CG3625-RA | 995 | CG3625-RA | 222..768 | 206..752 | 2735 | 100 | Plus |
| CG3625-RE | 1401 | CG3625-RE | 354..897 | 209..752 | 2720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 283889..284213 | 752..428 | 1625 | 100 | Minus |
| 2L | 23513712 | 2L | 284748..284969 | 430..209 | 1110 | 100 | Minus |
| 2L | 23513712 | 2L | 285428..285633 | 214..9 | 1015 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:39:34 has no hits.
MXO03537.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:40:07 Download gff for
MXO03537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3625-PB | 1..747 | 9..753 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:37 Download gff for
MXO03537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3625-RB | 87..837 | 1..752 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:34 Download gff for
MXO03537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3625-RB | 87..837 | 1..752 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:34 Download gff for
MXO03537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 283889..284210 | 431..752 | 100 | <- | Minus |
| 2L | 284748..284968 | 210..430 | 100 | <- | Minus |
| 2L | 285433..285640 | 1..209 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:37 Download gff for
MXO03537.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 283889..284210 | 431..752 | 100 | <- | Minus |
| arm_2L | 284748..284968 | 210..430 | 100 | <- | Minus |
| arm_2L | 285433..285640 | 1..209 | 98 | | Minus |
