MXO03549.5prime Sequence
859 bp (740 high quality bases) assembled on 2007-07-18
> MXO03549.5prime
CAGTCGACATGAATAGATGTTCGAATCCGTGGTTTCTGCGCGCCGTGCGC
CATCACATACGTAATCTCCACGAGATGAGGATTCCATACGCCCGTCCGGT
GGGCCCAAATCAGCGCAATTTCACGTTGGAGCCGCTGGGAAATCGAGAAC
TCATCCGTGTCCACGGGGCCGAGGTGGTGCCATTCCTGCAGGGTCTTGCG
ACCAACGATGTGGCCCGGATTCAGTCGCCGGGGGGTCCTGCCTCAATGTA
CGCCCATTTTCTCAACAAGGCGGGCAGGCTGCTGTACGACACCATCTTGT
ACCGCACCAACAACCCGGAAACCATCCTTGTTGAGTGCGATCGGGAGGCT
TCCTCGGACTTCCGACGCCATCTTCGCACCTACCGCGTTCGCAGGCGCAT
TGAGGTCGACAGTGTAGACGACGAGTATACCCCTTGGGTTATGTTTAACC
TCAAGGACGCTTCGGAGGCTGTACCCAATCCACATCCAGACTTATTTGTG
TCTCCCGACCCGAGGCTGCATGTCCTTGGCACTCGCATCCTGGCCCCCAC
CGACATGGACTGGTCCAAGCTGTCCAAATGTTTTGCTGACTTCGGTACCG
CCACAGCAGCCTCCTCCGACAATAGTTATCAACTGCTGCGCTACAAGCAA
GGAGTGGGCGAGGGCTGCTCGGAACTGACACCGGGCAAATGTTTTCCCCT
CGAAGCGAATGCGGATTACCTGCATGGCGTGAGCTTCCACAAGGGCTGCT
ATGTGGGCCAGGAGCTAACTGCCCGCGTCCATCATTCGGGCGTGATCCGC
AAGCGATACATGCCCATCCGGTTGACGGCCCCAATTGATGTGGGTTCCAG
CCAGGACGT
MXO03549.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:41:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8043-PA | 1047 | CG8043-RA | 1..851 | 9..859 | 4255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8043-RA | 1254 | CG8043-RA | 134..985 | 8..859 | 4260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8677113..8677964 | 8..859 | 4260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:43:34 has no hits.
MXO03549.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:41:15 Download gff for
MXO03549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8043-PA | 1..851 | 9..859 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:04 Download gff for
MXO03549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8043-RA | 125..985 | 1..859 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:14 Download gff for
MXO03549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8043-RA | 125..985 | 1..859 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:14 Download gff for
MXO03549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8677110..8677964 | 1..859 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:04 Download gff for
MXO03549.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4502832..4503686 | 1..859 | 99 | | Plus |
