MXO03553.5prime Sequence
763 bp (758 high quality bases) assembled on 2007-07-18
> MXO03553.5prime
CAGTCGACATGGGAAAAATGTTCGCCAGCAGAGGAATGCTGGTGCTTGGA
GTGCTTCTGGTATCAGCAATTGGTGGCCAATCGGAATCGATCCCCTGCAA
ACTCATCGATGCAGAACATGGCAAAGTGTGCGTCTGCACGGCGGACTATT
GTGATTATCTGGAGAATCCCGTCCTGACGGACGAAAATGAGTGGTTCCTT
ATCTCCAGTTCCAAACAGGGACTTCGGTTCTCCACAACTAGTGACAAATT
CGGTAAGGAGGAGAAGTTTACCGTGCAGGATTATGTGGAACCCACGCAGG
AGACTGCGAATGCGACAATCCTGTCTCGTTTGCTCGATAAGGTGGTGGAC
AGTGCTTTTACCTTGGAGTCCCGGGAGAGTTCCATAACTCGCACTGTAAC
CCTGCGACTGGACAGAAGTAAGACCCACCAGAAGATGGTTGGTTTCGGTG
GCAGCTACACCGGAGCAGTGGAATACCTGGTAGAGAACTTCAAGCATTCG
GAACTGGCTGACCATCTGTACAAGTCCTTTTACGCCGAGGATGGACTGGG
CTTCAATCTCATGCGAGTTTCCATTGGCGGCTGTGACTTTGACTTGGAAC
CCTGGTCCTATGCCGAAGAGGAGGGCGACACCGAGCTATCCGATATGGAT
GAACTAAACGCGCATGATGTGACGCGAGTTGCACAGATCAAGCGTCTCAT
TGAGGTGTCCGGAGTGAAGAATCTGTTGGTCAAAGGAGCTGCCTGGAGTT
CCCCGCCCTGGAT
MXO03553.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:41:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31148-PA | 1686 | CG31148-RA | 1..755 | 9..763 | 3775 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31148-RA | 1777 | CG31148-RA | 35..789 | 9..763 | 3775 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23700770..23701461 | 72..763 | 3460 | 100 | Plus |
| 3R | 32079331 | 3R | 23700655..23700720 | 9..74 | 330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:49:20 has no hits.
MXO03553.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:41:46 Download gff for
MXO03553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31148-PA | 1..755 | 9..763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:53 Download gff for
MXO03553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31148-RA | 29..789 | 1..763 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:41:21 Download gff for
MXO03553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31148-RA | 29..789 | 1..763 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:41:21 Download gff for
MXO03553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23700649..23700718 | 1..72 | 95 | -> | Plus |
| 3R | 23700771..23701461 | 73..763 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:53 Download gff for
MXO03553.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19526371..19526440 | 1..72 | 95 | -> | Plus |
| arm_3R | 19526493..19527183 | 73..763 | 100 | | Plus |
