MXO03569.5prime Sequence
838 bp (822 high quality bases) assembled on 2007-07-18
> MXO03569.5prime
CAGTCGACATGGAGAGTCCTGTAGAGCAACAAGAGGACACAGCCAAGCCA
GACGAAGATCTGCCCAACGAGCAGGTTACACAGTTCCTTCGCCAACTGGT
CAGCCAGCTGTGGCCAGAGCTGGGCGCCAATCCGGAACTGCGTCTGGAAA
GGGCGAGTGCCAAGGGCGACAACTATTTGGGCGTGGTGTGGCGCCTACAG
GCGGCATCCGATTCGAAACGCAGCCTGGTGGTTAAACTGCCGCCACAGAA
TCGCGTGCGCCGCAAGCAATTCTTTGCACGACCATGTTTCCTGCGCGAGA
CGGCAGCATATGAGGTCTTTCTGCCGCTGACTGCGTTAATTCAGGATAAG
TGGAAGATAATCGGAGATGATCGTTTCCGGCAGCACGCGCTCTGTTTCGG
AACTCGCCAGGATGAGCCCAACGAGTGCATCGTGCTGGAGGATCTGTCTT
GTGCCGGCTTCTCACTGCACAATCGCTTTCTCGACCTATCCGTCGAGCAT
GTGCGTCGCGTAATGCTCACCTATGCCAAATTACATGCTATATCATTGGC
CGGGAAACGGCAGTTGCCCGAGAAAATGCAACAACTGCAGCAGCTGGTGG
ATATCTTTGAGCAGCGACGCGATGATCATGCCTTGGGGGTCTACTTCGAG
AATCTGAAGGAAAGCGCCCTATCCGCACTGCTCGCACCGGCGGATGATGC
ATACAGAGTTCGTCTGGAGGCGTACTTCGCCAGAGGATCGTACTTTGAGC
TGCTGCTGCCTTTGGTCAGCGGATTCAATTGCGAACCCTTCGCTGTTATT
TGCCACGGCGATTGCTGGAATAACAACATTCTCTACAA
MXO03569.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:42:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1561-PA | 1293 | CG1561-RA | 1..830 | 9..838 | 4150 | 100 | Plus |
| CG1561-PB | 1908 | CG1561-RB | 616..1445 | 9..838 | 4150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1561-RB | 2160 | CG1561-RB | 631..1460 | 9..838 | 4150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11582716..11583545 | 838..9 | 4150 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:37:02 has no hits.
MXO03569.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:42:51 Download gff for
MXO03569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1561-PB | 608..1443 | 1..836 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:57 Download gff for
MXO03569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1561-RB | 623..1458 | 1..836 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:36 Download gff for
MXO03569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1561-RB | 623..1458 | 1..836 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:36 Download gff for
MXO03569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11582718..11583549 | 1..836 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:57 Download gff for
MXO03569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11476751..11477582 | 1..836 | 99 | | Minus |
