MXO03582.5prime Sequence
859 bp (795 high quality bases) assembled on 2007-07-18
> MXO03582.5prime
CAGTCGACATGGGCTTTGACGAGAAGCGTGAGCCCACCGGCGGCAGACTG
CGACTGCAGGACATTCCGGCCCTCACCCAGGACCACTGCCGCATGCGGGA
TCCGGCGGAGGTGGAGCGCATCATCAACGAGTTCGTCATCGGCGGACCAG
AGCGCATGCAAATCGTCTCCGACTTCGACTACACCATCACCAAGCAGCGC
ACGGAGGATGGAGGAGCAGTGCCCTCCAGTTTCGGGATCTTCAACGCCTG
CCAGTCGCTGCCGGAAAACTTTAAGGCGGAGACGGACAAGCTGTACCACA
AGTACCGGCCCATTGAGATCGATCCCCACATGCCCATCGCCGAGAAGGTG
CAGTACATGATCGAGTGGTGGACCAAGTCTGGCGAACTGACCAGCGGCTT
CCCCTTCGACCAGTCGGAAATAGATCAGATAGCCAGCAAGTACACGCATG
CGCTACGTGACCGCACCCACGAGTTCTTTGCGGACCTCCAGCGCTTGGGC
ATTCCCACGCTTGTCTTCTCCGCCGGGCTGGGCAACTCGGTGGTCTCGGT
TCTTCGCCAGGCCAACGTTTTGCATCCGAACGTGAAGGTAGTCTCGAACT
TTCTTCAGTTCCGGGATGGCCTTCTAGATGGCTTTCAGCAGCCGATGATA
CACACCTTCAACAAGAACGAAACGGTGCTAAATGAGACCAGCGAGTATTA
CGACTTGGTGCACACCAGGGACCACATCATAGTCATGGGCGACTCAATTG
GTGATGCAGACATGGCCTCCGGGGTGCCTGCCTCCTCACACATCATGAAA
ATCGGCTTCCTCTTCGACCACGTAGAAGCCAACATGAAGAAGTACATGGA
CACTTTTGA
MXO03582.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:44:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3362-PA | 960 | CG3362-RA | 1..851 | 9..859 | 4230 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cN-IIIB-RA | 1530 | CG3362-RA | 375..1225 | 9..859 | 4240 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24195872..24196722 | 9..859 | 4240 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:43:44 has no hits.
MXO03582.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:44:10 Download gff for
MXO03582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3362-PA | 1..850 | 9..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:10 Download gff for
MXO03582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3362-RA | 366..1224 | 1..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:18 Download gff for
MXO03582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cN-IIIB-RA | 366..1224 | 1..858 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:18 Download gff for
MXO03582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24195863..24196721 | 1..858 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:10 Download gff for
MXO03582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20083386..20084244 | 1..858 | 99 | | Plus |
