MXO03585.5prime Sequence
833 bp (702 high quality bases) assembled on 2007-07-18
> MXO03585.5prime
CAGTCGACATGTTTGTGCTCTACGAAACGCCGGCGGGCTACGCGATTTTC
AAGCTGCTGGACGAAAAGAAACTGGAGCAGGTGGACAATCTGTACCAGGA
GTTTGAGACTCCGGAGAAGGCCAACAAGCTGCTGAAGCTGAAGCACTTTG
AGAAATTCAATGACACCACAGAGGCGCTGGCCGCTGCAACGGCGGCGGTG
GAGGGCAAGGTAGCCAAGCCGCTGAAAAAGACACTCAAGAAGCTGCTCGT
TGACGACGTGCAGTCTTCGCTCTTGGTTGCCGATGCCAAACTGGGCACAG
CCATCAAGGACAAACTGTCGGTACAGTGTGTCTGCAACACTGGCGTCCAG
GAGCTGATGCGCTGTATTCGCCAGCAGGCGGACAGTCTGCTTGGTGGTCT
GCCCAAGCGTGAGATGACCGCCATGGCCCTGGGTCTTGCCCACTCCTTGT
CGCGCTACAAGCTTAAGTTCTCGCCCGACAAGATCGACACAATGATTGTG
CAGGCCCAGTGCTTGCTGGATGACCTGGACAAGGAGTTGAACAACTACAT
GATGCGTGCACGCGAGTGGTACGGTTGGCACTTTCCCGAGCTGGGCAAGA
TTATTACCGACAACATTGCCTTCGTGAAGACCATCAAGTTGGTGGGCACC
AGGGATAATATGGCCACAAGCGATCTGTCCGACATTCTGCCAGAAGATGT
GGAGGAAAAGGTCAAGGAGGCAGCTGAGATCTCTATGGGTACCGAAATCT
CCGAGGAGGATGTGCTGAACATTCAGTGTCTGTGCGACGAGATCATATCG
ATCAACGATTACCGCACCCACTTGTACGACTAC
MXO03585.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:44:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10206-PA | 1536 | nop5-RA | 1..825 | 9..833 | 4125 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:43:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nop5-RA | 1813 | CG10206-RA | 133..957 | 9..833 | 4125 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:43:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6917787..6918611 | 833..9 | 4125 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:43:54 has no hits.
MXO03585.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:44:26 Download gff for
MXO03585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10206-PA | 1..825 | 9..833 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:15 Download gff for
MXO03585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nop5-RA | 129..957 | 1..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:24 Download gff for
MXO03585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nop5-RA | 129..957 | 1..833 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:24 Download gff for
MXO03585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6917787..6918615 | 1..833 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:15 Download gff for
MXO03585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6917787..6918615 | 1..833 | 99 | | Minus |
