MXO03596.5prime Sequence
856 bp (772 high quality bases) assembled on 2007-07-18
> MXO03596.5prime
CAGTCGACATGACTAAAGACAGATTAGCCGCTCTCCATGCCGCCCAATCC
GATGACGAGGAGGAGACGGAGGTGGCCGTCAATGTGGATGGCCATGATTC
CTACATGGACGACTTCTTCGCCCAGGTGGAGGAGATCCGCGGGATGATCG
ACAAGGTGCAGGATAACGTCGAGGAGGTAAAGAAGAAGCACTCGGCCATC
CTGTCCGCCCCACAAACGGACGAGAAGACCAAGCAAGAGCTGGAGGATCT
GATGGCCGACATCAAGAAGAATGCCAATCGCGTTCGCGGCAAGCTCAAGG
GCATCGAGCAGAACATCGAGCAGGAAGAGCAGCAGAATAAGTCGTCGGCG
GATCTGAGAATTCGGAAGACGCAGCACTCGACGTTGTCACGGAAATTCGT
CGAAGTGATGACCGAGTACAATCGCACGCAGACCGACTACCGAGAGCGCT
GCAAGGGAAGGATACAGCGTCAACTGGAGATTACCGGACGACCGACCAAC
GACGATGAGCTGGAGAAGATGCTGGAGGAGGGCAACTCGTCTGTGTTCAC
GCAGGGCATCATCATGGAGACGCAGCAGGCCAAACAGACGCTGGCGGACA
TTGAGGCCCGCCACCAGGACATCATGAAGCTGGAGACATCGATCAAGGAG
CTGCACGACATGTTCATGGACATGGCCATGCTGGTGGAGTCGCAGGGCGA
GATGATCGATCGCATTGAGTACCATGTGGAGCACGCTATGGACTATGTGC
AGACGGCAACTCAGGACACCAAGAAGGCGCTCAAGTACCAGAGTAAAGCC
CGACGAAAGAAGATCATGATACTGATCTGCCTCACTGTGCTGGGCATCTT
AGCGGC
MXO03596.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:45:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31136-PA | 876 | Syx1A-RA | 1..848 | 9..856 | 4240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx1A-RB | 2639 | CG31136-RB | 1321..2168 | 9..856 | 4240 | 100 | Plus |
| Syx1A-RA | 2385 | CG31136-RA | 1321..2168 | 9..856 | 4240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24103596..24104443 | 856..9 | 4240 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:44:00 has no hits.
MXO03596.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:45:16 Download gff for
MXO03596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31136-PA | 1..848 | 9..856 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:19 Download gff for
MXO03596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx1A-RA | 1321..2168 | 9..856 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:27 Download gff for
MXO03596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx1A-RA | 1321..2168 | 9..856 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:27 Download gff for
MXO03596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24103596..24104443 | 9..856 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:19 Download gff for
MXO03596.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19929318..19930165 | 9..856 | 100 | | Minus |
