MXO03602.5prime Sequence
759 bp (755 high quality bases) assembled on 2007-06-27
> MXO03602.5prime
CAGTCGACATGTCCTCGAACCAGGAGCAGTCACCCGCCGCAGTGGCCGCG
GCCGTGGCCAGCTGCAGGCTAAGGAAACAGCAGCGCCGTCGACTGGCGGC
CTTCGACTTCGACCACACGATCGTTTCCCAGAACACGGACACCGTGGTGC
GCGACCTGCTGCCCACGGAGGTGACGAGCGCCAAGGTCAACGAGCTGGTT
GAAAACGACTGCTGGACGGAGTACATGGCCGAGGTGTTTCGCTTGCTGCA
CGAGCAACAGGTGTCGGAGGCGCGCATTAGGGACACCATTCGTGGCATAC
CCGAGGTGCCCGGATTCGTGCGCCTGATCAAGCATCTGGCCAAGCGGCTG
CACTACGACCTGATCATCATCAGTGACTCGAACAGCGTCTTTATCGACGA
GTGGCTGCGGGCACATAACTTGGCCGATTGCTTTGTGGCCATCTTTACCA
ATCCGGCGGAATTCGATGCCTCCGGACGGCTTATGGTCCGCGCCCACCAC
CAGCAGTCGGATTGCAAGCTGAGCGCCAGCAATTTGTGCAAGGGCCGCGT
GCTGGAGCACTTTGTCATCGAGCAGGACCTGCGGCGCAGCATACGCTATG
ACCACGTCTTCTATGTGGGCGACGGCAACAACGACATCTGCCCCGTGCTG
CGGCAGCGGGCGTGCGACTTTGCCTGCGCCCGCAAGGGGTTCGCAATGGA
GAAGCACCTGCTCCGCAATCGCAGCAAATTGAAGCTGCGCGCCCAGCTGC
TGATCTGGA
MXO03602.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:39:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12237-PA | 921 | CG12237-RA | 1..751 | 9..759 | 3755 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12237-RA | 1679 | CG12237-RA | 173..923 | 9..759 | 3755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19641947..19642697 | 759..9 | 3755 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:10:11 has no hits.
MXO03602.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:39:31 Download gff for
MXO03602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12237-PA | 1..750 | 9..758 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:51 Download gff for
MXO03602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12237-RA | 167..922 | 1..758 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:16 Download gff for
MXO03602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12237-RA | 167..922 | 1..758 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:16 Download gff for
MXO03602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19641948..19642701 | 1..758 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:51 Download gff for
MXO03602.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19535981..19536734 | 1..758 | 99 | | Minus |
