MXO03640.5prime Sequence
869 bp (832 high quality bases) assembled on 2007-06-27
> MXO03640.5prime
CAGTCGACATGCAGAACTCCTTTCTTCCACTGAACACACGGCGTTTTCGA
CAGCGGGCCCAGGTGGAAACGCCGGATACGGTGTACTGGGACCGACTGGC
GAAACCAGAACTACTCAAGGAGCACAACACCATCGATTATTTGGACTTCA
GTCCAAGCGATCCTGACAACTTTGTTGTGACCTGTTCGGTGCGCGTTCAG
ATTTACAACCTGGTGACCATGCTTGTGGTAAAGAACCTTTCCCGATTCCA
AAAGACCGCATACGGCGCCACCTTCCGGCAGGATGGTCGACTCCTGGCCG
CCGGCGACGAGGAGGGCCATGTCAAGCTATTCGACACCACCAGTCGCAAC
ATCTTGCGTTTGTTCAAGGGACACACGGCACCAGTACACCGCACCTTCTT
TACGGCGGACAAGCTGCAGCTAGCCAGTTTTGGAGACGACAAGTCGGTCC
GTCTGTGGGACGTGGCAAACGAGAAGGTGGTGCAAACGTACGAGGACACG
CACACCGACTACGTTCGTGCAGGCGCCATGCATCCGCAGGCAGGGCATAT
GTTCGTCTCCGGCGGCTACGATGGCAAGATCAAACTGTACGATACGAGAG
CGGAAACGGCGGTGCAGCGCACCTTAGATCACGGAGCTCCGGTGGAGTCC
ATGTTGTTCCTTCCGAACGGCTCTATTTTCGTCAGCGCCGGCGGCAGCCA
GGTGCGCGTATGGGATCTCATCAGCGGCTGCCGTCTGCTCACCATGATGT
CGCAGCATCACAAAACAGTAACTTGTCTGCGACTGGGATCCGATGGCAGG
AGATTGCTCTCAGGCGGGCTCGATAGGCACGTGAAAATCTACGATGTGAG
CACCTACAAAACAGTGCAC
MXO03640.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:43:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3071-PA | 1608 | CG3071-RA | 1..861 | 9..869 | 4305 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3071-RA | 1921 | CG3071-RA | 60..920 | 9..869 | 4305 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2263056..2263824 | 101..869 | 3845 | 100 | Plus |
| X | 23542271 | X | 2262896..2262988 | 9..101 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:00:26 has no hits.
MXO03640.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:43:17 Download gff for
MXO03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3071-PA | 1..861 | 9..869 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:25:03 Download gff for
MXO03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3071-RA | 52..920 | 1..869 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:29 Download gff for
MXO03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3071-RA | 52..920 | 1..869 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:29 Download gff for
MXO03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2262888..2262988 | 1..101 | 96 | -> | Plus |
| X | 2263057..2263824 | 102..869 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:25:03 Download gff for
MXO03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2156921..2157021 | 1..101 | 96 | -> | Plus |
| arm_X | 2157090..2157857 | 102..869 | 100 | | Plus |
