MXO03641.5prime Sequence
905 bp (830 high quality bases) assembled on 2007-06-27
> MXO03641.5prime
CAGTCGACATGCGGAAAATATACGACATACTGAAGAGGATGAGAGAAACG
GACAGTGGTTTCAATCCCCAGGAATTTGATACAGATGGCCTGGAAAATAG
TTTGGACTCGGATGGAGGCGAGGAAGGAGAGTCAGAAGAAGATGAGGCGG
AAGAAAACGTCACCGAGGGGGACATACTGGATGAAGACCTGGAGGAAGAC
ATTGCAACTCGACTGAAAGGCGTTGATATCAACGATGCGGATGAAGTTTG
GAGCCGGTTAACTACAGAGGAGCAAGATGAGTTCCAGAAATTGATCACCA
ATGGAGATATCATGAAGCTTATGCCAGACTACAAGCCCTGGTGGATCAAG
CCGAAGAACTCTAAGATTGTGATTATACCTACACCCGAAGAAGCTGCCAA
GAAAGAGAGCCGTGTTCCCGAAATTTTCGGGAGCATTGCCAAATTCTCCG
ATATATGCAAGAAAACTCCGTCTCCGTGCCTGCACTACAATTTGTGGAAC
ATACTAAGCGCCTACGCCTGTGTGGCTCGTTTCTTTGGCGGCGAACAGAG
GACCAATGCCAGCGAGGCAGTGGCCCACCTTGTCAATCTCAGCGCCACCT
TAAAGTACGGCACCAACTTCGAGGATGCTGAGGACGCTATTGTCTCCGTA
GAGATGGAAGCCATCACCACGGGTAATGGTCCTGCCGGCGCGGCTGCAGT
TGGAAGTGCTGCAGGAGGTGCCAATTTCCTCGTCGACAACAGGGAGCAGC
TGCAGCAGGATGCCCGCCAGTTGATGGCTACGAAGGAGCACAAGTTGGCC
GCCCTTAGTGATGTTCTCTATCTGCTGCAGCAGACGAAAGCAATCAGTCG
CCGTAAGAAATACCCAGGAAGCCGAGTTCCAGAAGCTGTTCGCTTTTGGC
AGCGG
MXO03641.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:43:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-PA | 987 | CG31223-RA | 1..851 | 9..859 | 4230 | 99.8 | Plus |
| CG31223-PA | 987 | CG31223-RA | 850..887 | 859..896 | 190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31223-RA | 1270 | CG31223-RA | 257..1155 | 6..905 | 4430 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20831442..20832340 | 6..905 | 4405 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:09:04 has no hits.
MXO03641.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:43:24 Download gff for
MXO03641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-PA | 1..896 | 9..905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:39 Download gff for
MXO03641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 251..1155 | 1..905 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:24 Download gff for
MXO03641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31223-RA | 251..1155 | 1..905 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:24 Download gff for
MXO03641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20831436..20832340 | 1..905 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:39 Download gff for
MXO03641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16657158..16658062 | 1..905 | 99 | | Plus |
