MXO03644.5prime Sequence
873 bp (843 high quality bases) assembled on 2007-06-27
> MXO03644.5prime
CAGTCGACATGTTTAGCTCTACGAGAACTATTTTGTGCGCATTTCTATTG
CTGTATCCTTACGGATCCCTGATAGAAGCCCAGGAGGGCAGGCGCTATGT
GTGTCTATTATCAGATCCTCCCAATCAGTGCAGTGAATATTGCGTATCCG
CACTGCAGCCGGTCATCGATCACCTTTCGAAGGAGCAACAGGACTGGGGA
GCCTGCGAGGTGAAACTTAATGGAAGCGTCGCGAAACTGGATAAGATCGA
AGACCAGTTGACGGCGACACAAATCCAAATAGAAGCCCAGCAAGCATTCC
TTGTGAACAACATTTCGAAGGCAATCAAAACCGAGGACCTTGAGCAAAAA
CTAAAGGATATCGAAGGCAATCAGACAGCGCTGAGTAATCAGTTGAAAGA
TGGACAGAAGAGGACGGAAAACCAGTTGACAGCCATCCAGAAGACTCTAT
CCGATATCGAAAGGAAACTCGTGCTGCAGAGATATCAACAGATAGGATCG
AGATATTTCTACATCGAACACAACTTACAGGTGAACTGGAGGACCGCCGA
GCAGAGGTGCATTGAAATGGGCGGCCACCTCGCAGCATTCCAAAATGCCG
AGGAATACAACGCCATAGTGGGCCAATTGAACAAGGCGAACTACTGGCTG
GGTGTCAACGATCTGGCCAAGCAGGGCGAGTTTATATCCTTGGCCTCCGG
CAAACGAGCTACCTACTTCAAGTGGCGCAAAAATGAACCCAAATACAATA
ATCCTACCCAGCACTGCGCCTACGTTTTTGGGCACGAAAACATTATGATC
GTTCTGTCCTGTACCACTGACGTTATGCATTTCATTTGCCAATCAGACAG
TGATGTTGCAAGCTTTCTAGACC
MXO03644.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:43:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15818-PA | 852 | CG15818-RA | 1..849 | 9..857 | 4220 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:56:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15818-RA | 1321 | CG15818-RA | 47..895 | 9..857 | 4230 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:56:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7410955..7411803 | 9..857 | 4230 | 99.9 | Plus |
| 2L | 23513712 | 2L | 7399552..7399667 | 102..217 | 220 | 79.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:56:05 has no hits.
MXO03644.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:43:46 Download gff for
MXO03644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15818-PA | 1..852 | 9..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:52 Download gff for
MXO03644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15818-RA | 47..901 | 9..866 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:02 Download gff for
MXO03644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15818-RA | 47..901 | 9..866 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:02 Download gff for
MXO03644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7410955..7411801 | 9..855 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:52 Download gff for
MXO03644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7410955..7411801 | 9..855 | 99 | <- | Plus |
