MXO03674.5prime Sequence
708 bp (429 high quality bases) assembled on 2007-06-27
> MXO03674.5prime
CAATCGACATGTCGATTTTTTCCGCCCGCCTGGCGTCCTCGGTCGCCCGT
AACCTGCCCAAGGCTGCCAACCAGGTCGCCTGCAAAGCCGCTTATCCCGC
CGCCAGTCTTGCTGCCCGCAAGCTCCATGTGGCCAGCACGCAGCGTAGCG
CTGAGATCTCCAACATCCTGAAGGAGCGCATCCTGGGCGTCGCCCCCAAG
GCTGATCTGGAGGAAACCGGCCGTGTGCTGAGCATCGGTGACGGTATCGC
CCGTGTCTACGGTCTGAACAACATCCAGGCCAATGAGATGGTGGAGTTCT
CCTCCGGACTGAAGGGCATGGCCCTTAACTTGGAGCCCGACAACGTCGGT
GTTGTGGTCTTCGGTAACGATAATCTGATCAAGCATGGCGATATCGACAA
GCGTACCGGTGCCATCGTGGATGTGCCCGTCGGTGATGAGCTGCTGGGTC
GCGTCGTCAATGCCCTGGGAAATGCCATCGACGGCAAGGGTGCCATCAAC
ACCAAGGACCGTTTCCGTGTGGGAATCAAGGCCCCCGGCATCATCCCCCG
TGTGTCCGTGCGCGAGCCCATGCAGACCGGTATCAAGGCCGTCGACTCCC
TGGTGCCCATCGGTCGTGGTCAGCGTGAGCTGATCATTGGCGATCGTCAG
ACTGGTAAGACCGCTCTGGACATCGACACCATCATCAACCAGAAGCGCTT
CAACGAGG
MXO03674.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:46:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3612-PA | 1659 | blw-RA | 1..700 | 9..708 | 3325 | 99 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:56:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blw-RA | 2252 | CG3612-RA | 106..805 | 9..708 | 3395 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:56:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22799893..22800476 | 72..655 | 2830 | 99 | Plus |
| 2R | 25286936 | 2R | 22799204..22799271 | 9..76 | 340 | 100 | Plus |
| 2R | 25286936 | 2R | 22800568..22800621 | 655..708 | 255 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:56:23 has no hits.
MXO03674.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:46:41 Download gff for
MXO03674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3612-PA | 1..700 | 9..708 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:04 Download gff for
MXO03674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blw-RA | 98..805 | 1..708 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:09 Download gff for
MXO03674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blw-RA | 98..805 | 1..708 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:09 Download gff for
MXO03674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22799196..22799269 | 1..74 | 94 | -> | Plus |
| 2R | 22799896..22800476 | 75..655 | 98 | -> | Plus |
| 2R | 22800569..22800621 | 656..708 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:04 Download gff for
MXO03674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18686701..18686774 | 1..74 | 94 | -> | Plus |
| arm_2R | 18687401..18687981 | 75..655 | 98 | -> | Plus |
| arm_2R | 18688074..18688126 | 656..708 | 98 | | Plus |
