MXO03676.5prime Sequence
849 bp (838 high quality bases) assembled on 2007-06-27
> MXO03676.5prime
CAGTCGACATGGGTTGCTTTGGGTCGCCCACCTCCAAGCAGTCGGACGTG
AACTCGGAGGACTCGAAGAGCCAGAAGCGCCGGAGCGATGCAATATCTAG
ACAGTTGCAGAAGGACAAACAGCTCTACAGGGCCACACACAGGCTGCTCC
TCCTGGGGGCGGGCGAGTCCGGCAAATCAACCATAGTCAAGCAAATGCGA
ATATTGCATGTCGACGGATTTTCTGACTCGGAAAAGAAACAGAAAATTGA
TGATATTAAAAAGAATATTCGAGACGCTATCTTGACTATTACAGGAGCCA
TGAGCACACTTAATCCACCTGTAGCTTTAGAAAAGAAGGAAAATGAACCC
AGAGTGGAGTACATTCAGGATTATGCATCTAGTCCGGACTTTAATTATCC
TCCTGAATTTTATGAACATACAGAAGAACTATGGAAAGACAAGGGCGTTC
TTCAAACCTATGAGAGGTCGAATGAGTATCAATTAATCGATTGTGCGAAA
TACTTCCTGGACCGAGTGAGCACAATCAAGAATCCAAACTACACCCCTAA
TGAGCAGGATATTCTTCGGTGCCGTGTTTTGACTTCTGGAATATTTGAAA
CAAGATTTCAAGTGGACAAAGTAAACTTTCACATGTTCGATGTCGGTGGC
CAGCGGGACGAGCGTAGGAAATGGATTCAGTGTTTCAATGATGTAACTGC
TATCATATTCGTAACTGCGTGCTCAAGTTATAACATGGTTTTGCGGGAAG
ATCCCACCCAGAACCGACTTCGAGAATCTTTGGATTTGTTCANGAGTATT
TGGAACAACAGATGGCTTCGCACGATTTCTATTATACTATTTTTAAATA
MXO03676.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:46:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2835-PC | 1149 | G-salpha60A-RC | 1..841 | 9..849 | 4186 | 99.8 | Plus |
| CG2835-PB | 1158 | G-salpha60A-RB | 1..841 | 9..849 | 4186 | 99.8 | Plus |
| CG2835-PA | 1149 | G-salpha60A-RA | 1..841 | 9..849 | 4186 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Galphas-RE | 1826 | CG2835-RE | 489..1329 | 9..849 | 4194 | 99.9 | Plus |
| Galphas-RD | 1646 | CG2835-RD | 300..1140 | 9..849 | 4194 | 99.9 | Plus |
| Galphas-RA | 1850 | CG2835-RA | 513..1353 | 9..849 | 4194 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23944465..23944740 | 9..284 | 1380 | 100 | Plus |
| 2R | 25286936 | 2R | 23945898..23946077 | 632..811 | 889 | 99.4 | Plus |
| 2R | 25286936 | 2R | 23945696..23945824 | 503..631 | 645 | 100 | Plus |
| 2R | 25286936 | 2R | 23944960..23945080 | 382..502 | 605 | 100 | Plus |
| 2R | 25286936 | 2R | 23944806..23944905 | 284..383 | 500 | 100 | Plus |
| 2R | 25286936 | 2R | 23946134..23946174 | 809..849 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:46:14 has no hits.
MXO03676.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:46:55 Download gff for
MXO03676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2835-PA | 1..840 | 9..848 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:00 Download gff for
MXO03676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphas-RA | 508..1352 | 1..848 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:31 Download gff for
MXO03676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Galphas-RA | 508..1352 | 1..848 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:31 Download gff for
MXO03676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23944460..23944740 | 1..284 | 98 | -> | Plus |
| 2R | 23944807..23944903 | 285..381 | 100 | -> | Plus |
| 2R | 23944960..23945080 | 382..502 | 100 | -> | Plus |
| 2R | 23945696..23945824 | 503..631 | 100 | -> | Plus |
| 2R | 23945898..23946077 | 632..811 | 99 | -> | Plus |
| 2R | 23946137..23946173 | 812..848 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:00 Download gff for
MXO03676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19831983..19832263 | 1..284 | 98 | -> | Plus |
| arm_2R | 19832330..19832426 | 285..381 | 100 | -> | Plus |
| arm_2R | 19832483..19832603 | 382..502 | 100 | -> | Plus |
| arm_2R | 19833219..19833347 | 503..631 | 100 | -> | Plus |
| arm_2R | 19833421..19833600 | 632..811 | 99 | -> | Plus |
| arm_2R | 19833660..19833696 | 812..848 | 100 | | Plus |
