MXO03688.5prime Sequence
795 bp (714 high quality bases) assembled on 2007-06-27
> MXO03688.5prime
CAGTCGACATGGAACTTGCAGAGAAATCGACAGCAGCACCTGGTGGTGCC
ACATCCTCCACTGCATCGAGTGCCGCTGGCAGTAAATCGGGATCCGGTTC
CAGTGCTGGCAATGGTACTGGGGCCAACTCAAACAACAAGCAGGCGACGC
TGTCGCGAAATCTATGGGTTTCTGGGCTGTCCACTTTAACCCGTGCCAGC
GACCTTAAGGCAATCTTCTCCAAGTTTGGCAAGGTGATTGGGGCCAAGGT
GGTCACCAATACGCGTACTCCGGGCACTCGCTGCTACGGATACGTGACCA
TGTCCTCCTCGGCAGACGCCTCGCGTTGCATCGAAAATCTGCACCGCACC
GAATTGCATGGACGCATCATTTCGGTGGAGCGTACCAAGAACGAGATTGG
CGGCAGCTTGAATTCCAAAGAGGGCAAGGGCAAGGCTCCGGGCGACGCCG
GAAACAAGAAGAAGGAAGACGACAGTGGCAAAAAGTCTGGTAGTGGCAAG
GGCTCCAGCTCCAACAGTGGCGATGACAAGAAGGGCGGCGATGGAAACGG
CGACAGCAAGTCTGTTGGTGGCGATTTAAAGCGTGATGGCAAGGAGAGCA
ACAGGGCCCGCAGCCGTCGCAACGATGACCGGGGCAAGTCGTTGGCAAGC
CAGGATAGACCGCGCCACGATCGCGAGCGATCCGCAAAGGGTAGTCAGGA
TCATCGTTCGGGGCGCAATCCACGCGACGTCGACCGTGAGATTCAGCAGC
GCCAGAGGGAGCGCGAGCGTCGTCAACGAGAGATGCTGTCCTACC
MXO03688.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:48:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6995-PA | 2001 | CG6995-RA | 1..787 | 9..795 | 3935 | 100 | Plus |
| CG6995-PC | 1179 | CG6995-RC | 1..787 | 9..795 | 3935 | 100 | Plus |
| CG6995-PB | 2787 | CG6995-RB | 798..1573 | 20..795 | 3880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:04:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Saf-B-RC | 4332 | CG6995-RC | 1817..2605 | 7..795 | 3945 | 100 | Plus |
| Saf-B-RA | 4003 | CG6995-RA | 1817..2605 | 7..795 | 3945 | 100 | Plus |
| Saf-B-RB | 3124 | CG6995-RB | 951..1726 | 20..795 | 3880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:04:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24819714..24820502 | 7..795 | 3945 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:04:33 has no hits.
MXO03688.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:48:15 Download gff for
MXO03688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6995-PC | 1..787 | 9..795 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:45 Download gff for
MXO03688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Saf-B-RA | 1812..2605 | 1..795 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:06 Download gff for
MXO03688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Saf-B-RA | 1812..2605 | 1..795 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:06 Download gff for
MXO03688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24819709..24820502 | 1..795 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:45 Download gff for
MXO03688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20645431..20646224 | 1..795 | 99 | | Plus |
