MXO03690.5prime Sequence
555 bp (555 high quality bases) assembled on 2007-06-27
> MXO03690.5prime
CAGTCGACATGTCAGACGAGGACGCTCCCCAAAAGCAAATTCCTTTTGAT
GAACTAGAAATTGTGCACGTGCAAAGCCAGGACACGGTCGGCAATCGGAG
GACGAGACGGTCGAGATGGATGAGTGAGTTCCCGGCCGAGGACTCGGCGC
TCGGCGCTCGGAACAACCCCCAAAAGCAAATGTTGGGGTGTGTCGGAGTT
AACGAGTTCAAATGTATTCATGAGCCGGATCTTACCAGCCAGCTGGCTGC
TATGTGGGAGGTGTCGCATGGGGGAGCCCCAGCCCGCTGCCAAAGTCCTC
CCCCTCTCGAGGATTTGGCTTCCTGCCAGCTGCGAGGGTTGCCTGTGCCT
GTGACTGTTCCATTGCCTTTGCAACCCGACTTTCCTGACTTATTGCCTCG
CGGTCATGTGGGAGGATGTGGCTCGGCTAAAAGGCCCTCCTCCACTCAAT
GTTTTGCAATTTGCAGGTGTTTTCATCATCAATTTCGACCAGCTGTAGAC
ATTTTTGAACAAGCCAACAGGCTCAGGGCAATACATTCGGCAAGCTTTCT
AGACC
MXO03690.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:48:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32341-PA | 534 | CG32341-RA | 1..531 | 9..539 | 2605 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 23:34:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 797341..797871 | 9..539 | 2625 | 99.6 | Plus |
Blast to na_te.dros performed 2014-11-28 23:34:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| jockey2 | 3428 | jockey2 JOCKEY2 3428bp | 70..99 | 80..51 | 105 | 83.3 | Minus |
MXO03690.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:48:31 Download gff for
MXO03690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32341-PA | 1..534 | 9..542 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:48 Download gff for
MXO03690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 797341..797871 | 9..539 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:48 Download gff for
MXO03690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 797341..797871 | 9..539 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:29:24 Download gff for
MXO03690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 797341..797871 | 9..539 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:29:24 Download gff for
MXO03690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 797341..797871 | 9..539 | 99 | | Plus |
