Clone MXO03703 Report

Search the DGRC for MXO03703

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:37
Well:3
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG3624-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO03703.5prime Sequence

612 bp (612 high quality bases) assembled on 2007-07-18

> MXO03703.5prime
CAGTCGACATGATGTCCAGAACAGATCTTCTAATCGCCGGACTCCTACTG
ATCGTGGGCAGTGCCGCGGTGATCTCCTACCCACAATCCTCGATGGACGA
TGACCAAATGCAGGCCGATGATGACTTCGACTACGGAGGCGAAGACCAGA
GTGCGCCCAGTCCGCAGACGAAGTCCCCCAATCCTGTAGCCAGCGAAAAG
ATCAACAAGACCCTCAGTGTGACGGGAATCCGTGGCGAGGATGTGGTTCT
CAAGTGCGATGTGGGAAGCAATTTGCACAGCTCAGACGTGGTGGTCTTGT
GGTACTTCGGCGATAATGTCATTTCCAATGGCAAGAACCTGGTGCAGCCC
AACTTCAAACTGGACGCCAACTACGACCTGACCATTTTGAAGGCCACCCC
CCAGGTGGCTGGCAGCTATCTCTGCAAGGTTCTGCCCTCCGGATCCGTGG
TCAACACGAAGGTGACCATCGCCGAGCATTCCCTGGACGCCATTGCCCCG
GAGAGCTCCACATCCGCGGCGGGATCTGCGAGCAGTTTTCTGGGATGCAC
TGTCCTGGCATCGACCGTGTTGCTCCTCCTGGGGATGGGCGCACATGCAA
GCTTTCTAGACC

MXO03703.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:45:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG3624-PA 591 CG3624-RA 1..377 9..385 1885 100 Plus
CG3624-PA 591 CG3624-RA 391..588 399..596 990 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:10
Subject Length Description Subject Range Query Range Score Percent Strand
babos-RB 1303 CG3624-RB 361..948 9..596 2865 99.1 Plus
babos-RA 1116 CG3624-RA 361..948 9..596 2865 99.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22394231..22394553 596..274 1540 98.5 Minus
2R 25286936 2R 22394612..22394816 273..69 1025 100 Minus
2R 25286936 2R 22401639..22401699 69..9 305 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:38:09 has no hits.

MXO03703.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:45:25 Download gff for MXO03703.5prime
Subject Subject Range Query Range Percent Splice Strand
CG3624-PA 1..591 9..597 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:18 Download gff for MXO03703.5prime
Subject Subject Range Query Range Percent Splice Strand
babos-RA 354..954 1..604 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:02 Download gff for MXO03703.5prime
Subject Subject Range Query Range Percent Splice Strand
babos-RA 354..954 1..604 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:02 Download gff for MXO03703.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 22394225..22394553 274..604 97 <- Minus
2R 22394612..22394815 70..273 100 <- Minus
2R 22401639..22401706 1..69 94   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:18 Download gff for MXO03703.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18281730..18282058 274..604 97 <- Minus
arm_2R 18282117..18282320 70..273 100 <- Minus
arm_2R 18289144..18289211 1..69 94   Minus