MXO03703.5prime Sequence
612 bp (612 high quality bases) assembled on 2007-07-18
> MXO03703.5prime
CAGTCGACATGATGTCCAGAACAGATCTTCTAATCGCCGGACTCCTACTG
ATCGTGGGCAGTGCCGCGGTGATCTCCTACCCACAATCCTCGATGGACGA
TGACCAAATGCAGGCCGATGATGACTTCGACTACGGAGGCGAAGACCAGA
GTGCGCCCAGTCCGCAGACGAAGTCCCCCAATCCTGTAGCCAGCGAAAAG
ATCAACAAGACCCTCAGTGTGACGGGAATCCGTGGCGAGGATGTGGTTCT
CAAGTGCGATGTGGGAAGCAATTTGCACAGCTCAGACGTGGTGGTCTTGT
GGTACTTCGGCGATAATGTCATTTCCAATGGCAAGAACCTGGTGCAGCCC
AACTTCAAACTGGACGCCAACTACGACCTGACCATTTTGAAGGCCACCCC
CCAGGTGGCTGGCAGCTATCTCTGCAAGGTTCTGCCCTCCGGATCCGTGG
TCAACACGAAGGTGACCATCGCCGAGCATTCCCTGGACGCCATTGCCCCG
GAGAGCTCCACATCCGCGGCGGGATCTGCGAGCAGTTTTCTGGGATGCAC
TGTCCTGGCATCGACCGTGTTGCTCCTCCTGGGGATGGGCGCACATGCAA
GCTTTCTAGACC
MXO03703.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:45:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3624-PA | 591 | CG3624-RA | 1..377 | 9..385 | 1885 | 100 | Plus |
CG3624-PA | 591 | CG3624-RA | 391..588 | 399..596 | 990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
babos-RB | 1303 | CG3624-RB | 361..948 | 9..596 | 2865 | 99.1 | Plus |
babos-RA | 1116 | CG3624-RA | 361..948 | 9..596 | 2865 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22394231..22394553 | 596..274 | 1540 | 98.5 | Minus |
2R | 25286936 | 2R | 22394612..22394816 | 273..69 | 1025 | 100 | Minus |
2R | 25286936 | 2R | 22401639..22401699 | 69..9 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:38:09 has no hits.
MXO03703.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:45:25 Download gff for
MXO03703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3624-PA | 1..591 | 9..597 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:18 Download gff for
MXO03703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
babos-RA | 354..954 | 1..604 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:02 Download gff for
MXO03703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
babos-RA | 354..954 | 1..604 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:02 Download gff for
MXO03703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22394225..22394553 | 274..604 | 97 | <- | Minus |
2R | 22394612..22394815 | 70..273 | 100 | <- | Minus |
2R | 22401639..22401706 | 1..69 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:18 Download gff for
MXO03703.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18281730..18282058 | 274..604 | 97 | <- | Minus |
arm_2R | 18282117..18282320 | 70..273 | 100 | <- | Minus |
arm_2R | 18289144..18289211 | 1..69 | 94 | | Minus |