MXO03712.5prime Sequence
450 bp (449 high quality bases) assembled on 2007-07-18
> MXO03712.5prime
CAGTCGACATGTATGCCGCCTCGATCCTGATCCTGCACCTGACTTGGGCC
GTGGCCACGATCGCGGCCAACGGTGCCGGCCATAATGGCCCGGTGGCATC
CGGAGCAGGGCCTAACGGATTGCAGTGCCAGCCCATCGCCGTGTCCGCCT
GCCAAGGCCTCGGCTACAACATGACCGCACTGCCCAACCTGGCAGGTCAC
ACCAATCAGCTGGAGGCTGAGCTCCAGATTGCCAAACTGGTGCCACTAAT
AGAATCCGGCTGCTCGCGTCGCGCCCGCTTTTTGCTCTGCTCGTCTCTGT
TTCCGCTGTGCACGCCGGATGTGCCACGCCCCGTTGCCGCCTGCAAATTG
CTGTGCGAGACTGTTAGGGGCGAGTGTATGGAAAACGCTCCGCCGGAACT
GATGGAGCTGTGGCCTTCGTTCCTTAACTGCGACGGACTGCCGCAGCCGG
MXO03712.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:45:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16785-PA | 1746 | fz3-RA | 1..442 | 9..450 | 2210 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz3-RC | 3250 | CG16785-RC | 285..726 | 9..450 | 2210 | 100 | Plus |
| fz3-RA | 2249 | CG16785-RA | 204..645 | 9..450 | 2210 | 100 | Plus |
| fz3-RB | 2304 | CG16785-RB | 474..700 | 224..450 | 1135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 781473..781698 | 225..450 | 1130 | 100 | Plus |
| X | 23542271 | X | 770229..770447 | 9..227 | 1095 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:06:41 has no hits.
MXO03712.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:45:56 Download gff for
MXO03712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16785-PA | 1..442 | 9..450 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:41 Download gff for
MXO03712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz3-RA | 197..645 | 1..450 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:35 Download gff for
MXO03712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz3-RA | 197..645 | 1..450 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:35 Download gff for
MXO03712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 770222..770447 | 1..227 | 98 | -> | Plus |
| X | 781476..781698 | 228..450 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:41 Download gff for
MXO03712.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 664255..664480 | 1..227 | 98 | -> | Plus |
| arm_X | 675509..675731 | 228..450 | 100 | | Plus |
