MXO03714.5prime Sequence
380 bp (302 high quality bases) assembled on 2007-07-18
> MXO03714.5prime
CAATCGACTTGGACTAACGACCGAAACCTTTGTTTGGAACCGGATCCAGA
CGCTCCCGCAATCCCCCGGATCAGCTAAGCCTGAATAATCTTAGCATACG
CCCCCCGCCCTCGTCCACGTCGGCCACTTCTTCGGGATCCACCTCCTCGG
GCTCAAGTTCCTCATCACAGCACAACCATGTGACCCGCTGTTTTGGTGCC
CAGCAGCCACAGCAAACCCCGCCGGTGGCCAGCAGACGAGTGCCACCGGT
GCCGGCAGCATCGAGCAGCAGCGCTGCCGATCGTCACCGGGAGCGAATTC
GCCAGGAGGCCTGTGGTAAGCTACAGGTTGGTGAGGGCGGGGCTAATACG
GACACATTTACTTCAGACGATCTCGAGGAT
MXO03714.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:46:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9738-PA | 1275 | Mkk4-RA | 8..372 | 16..380 | 1450 | 95.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mkk4-RC | 4110 | CG9738-RC | 293..657 | 16..380 | 1600 | 95.9 | Plus |
| Mkk4-RB | 2525 | CG9738-RB | 293..657 | 16..380 | 1600 | 95.9 | Plus |
| Mkk4-RA | 2698 | CG9738-RA | 293..657 | 16..380 | 1600 | 95.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8649979..8650319 | 380..40 | 1525 | 96.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:48:57 has no hits.
MXO03714.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:46:02 Download gff for
MXO03714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9738-PA | 2..372 | 10..380 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:22:16 Download gff for
MXO03714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mkk4-RA | 287..657 | 10..380 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:49 Download gff for
MXO03714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mkk4-RA | 287..657 | 10..380 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:49 Download gff for
MXO03714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8649979..8650325 | 34..380 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:22:16 Download gff for
MXO03714.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4475701..4476047 | 34..380 | 95 | | Minus |
