MXO03717.5prime Sequence
786 bp (757 high quality bases) assembled on 2007-07-18
> MXO03717.5prime
CAGTCGACATGAGTTGCTACAGAAAACGGCACTTTCTATTGTGGCTCTTG
CGTGCTGTGTGTATGTTGCACTTAACCGCGAGAGGGGCATATGCCACAGT
TGGGTTGCAAGGAGTGCCGACATGGATATATCTCGGCCTCAAGTCCCCCT
TCATCGAGTTTGGCAACCAGGTGGAGCAGCTGGCCAATTCCAGCATACCA
CTGAACATGACCAAGGACGAGCAGGCCAATATGCATCAAGAGGGCCTACG
CAAGCTCGGTACGTTCATAAAGCCAGTGGACCTGCGGGACTCGGAGACTG
GCTTCGTCAAGGCCGATCTCACCAAGAGACTGGTATTCGATAGACCGAAC
AACATTACATCTCGCCCTATTCACCCGATACAGGAGGAGATGGATCAGAA
GCAGATAATCCTGCTCGACGAGGATACCGACGAGAATGGCCTGCCAGCCA
GTCTCACCGACGAGGATCGCAAGTTTATAGTGCCGATGGCGCTCAAGAAT
ATATCGCCCGATCCACGCTGGGCGGCCACTACACCGAGTCCCTCCGCTTT
GCAGCCGAACGCTAAAGCCATCTCGACCATTGTGCCCTCGCCTCTGGCCC
AGGTCGAGGGGGATCCCACGTCCAACATCGATGACCTGAAGAAGCACATA
CTCTTCTTGCACAACATGACCAAGACCAATTCGAACTTCGAGTCGAAATT
CGTTAAATTCCCGAGCCTGCAAAAGGACAAGGCCAAGACATCGGGAGCTG
GCGGTTCGCCGCCCAATCCCCAGCGGCCCCCGCGGC
MXO03717.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:46:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6407-PA | 3015 | Wnt5-RA | 1..778 | 9..786 | 3815 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:02:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt5-RB | 4005 | CG6407-RB | 554..1331 | 9..786 | 3845 | 99.6 | Plus |
| Wnt5-RA | 3850 | CG6407-RA | 554..1331 | 9..786 | 3845 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:02:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18504075..18504852 | 786..9 | 3845 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:02:01 has no hits.
MXO03717.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:46:27 Download gff for
MXO03717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6407-PA | 1..778 | 9..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:42 Download gff for
MXO03717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 546..1331 | 1..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:17 Download gff for
MXO03717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt5-RA | 546..1331 | 1..786 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:17 Download gff for
MXO03717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18504075..18504859 | 1..786 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:42 Download gff for
MXO03717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18398108..18398892 | 1..786 | 99 | | Minus |
