MXO03718.5prime Sequence
861 bp (753 high quality bases) assembled on 2007-07-18
> MXO03718.5prime
CAGTCGACATGGCGGCCAGGAGCGTGCGGCTAGCGCAGCTTTTGCTATTT
ACCCTGCTCTGCGGCTTCGTCGGCCTGTCAGCCGCCAAGCACCTGGACCT
GGATGGTATCCACCACCACCAGCACCACCTGCACAGCGCCACCACGCACC
ACAGACGTCGCCTACAGCGGGACTCGCGGGCGAAGGACGCCGTTGGGGGA
TCGACCCACCAGTGTGATGCCGTCAAGAGCTACTTCGAATCGATCGACAT
CAAGTCGAGTGGGACTTACAGCGAAAAAGGCGCCATTTGTGGCGGAAACT
GCTGCAACAATGCCACGGAGCTGGAGCTGCGGGACAAAGCCGCCGGAATG
TTCGAGCAACTGCTTCATCATCACACCAGCAGCCTGCGCGGAGTCCTCGA
GACGAATGCCAAACAGTTCCAAAGTCACGTCCTGGAATTGGCGCAGATTT
CGGAGAACATGACCCACTCGCTCTTTTCGAAGGTTTATACCCGTATGGTG
CCTTCATCGCGTATGATGATCCATCAACTGTACACCGAAATCATGAACCA
TCTGATTTACACCTCCAACTATACGAACAGCAATGGCCAACTGGGCAGGC
GAGGAATTGGCAGTGTCCAGAGCAACTTGGAGGAGGCTGTCAGGCACTTC
TTTGTTCAGTTGTTCCCCGTGGCCTACCACCAGATGGTCCATCTGTCCAA
GAACAATTTGGGTGACTTGCACGAGGACTACGTTAACTGCCTGCAGCACA
ACTTCGACGAGATGCATCCATTCGGGGACATTCCCCAGCAAGTGCAGTCC
AACTTGGGCAAGAGTGTCCATATGTCCAATGTCTTCATGAATGCCCTGCT
CCAGGCCGCCC
MXO03718.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:46:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4974-PA | 1881 | dally-RA | 1..852 | 9..860 | 4260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dally-RB | 4483 | CG4974-RB | 729..1580 | 9..860 | 4260 | 100 | Plus |
| dally-RA | 3444 | CG4974-RA | 729..1580 | 9..860 | 4260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8886497..8886809 | 548..860 | 1565 | 100 | Plus |
| 3L | 28110227 | 3L | 8828233..8828504 | 9..280 | 1360 | 100 | Plus |
| 3L | 28110227 | 3L | 8877156..8877303 | 278..425 | 740 | 100 | Plus |
| 3L | 28110227 | 3L | 8886275..8886398 | 424..547 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:26:57 has no hits.
MXO03718.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:46:34 Download gff for
MXO03718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4974-PA | 1..852 | 9..861 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:48 Download gff for
MXO03718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dally-RA | 721..1580 | 1..861 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:51 Download gff for
MXO03718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dally-RA | 721..1580 | 1..861 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:51 Download gff for
MXO03718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8828225..8828503 | 1..279 | 98 | -> | Plus |
| 3L | 8877158..8877301 | 280..423 | 100 | -> | Plus |
| 3L | 8886275..8886398 | 424..547 | 100 | -> | Plus |
| 3L | 8886497..8886809 | 548..861 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:48 Download gff for
MXO03718.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8821325..8821603 | 1..279 | 98 | -> | Plus |
| arm_3L | 8870258..8870401 | 280..423 | 100 | -> | Plus |
| arm_3L | 8879375..8879498 | 424..547 | 100 | -> | Plus |
| arm_3L | 8879597..8879909 | 548..861 | 99 | | Plus |
