MXO03721.5prime Sequence
880 bp (838 high quality bases) assembled on 2007-07-18
> MXO03721.5prime
CAGTCGACATGACGTCGCAAGTGCCGTGCTACACGATAATCAACTCGCCG
GACCTGGAGGTGACCAACGAGATGCAACTGAAGCGCGATCTCGAAAAGGG
CGACACGAACGTGAAGATCGAGACGCTGAAGCGGGTAATCAAGTTGCTGC
TGAATGGGGAGCGGTATCCGGGCCTGATCATGACCATCATACGCTTCGTC
CTGCCGGTGCAGAACCACACGATCAAGAAGCTGCTGCTCATCTTCTGGGA
AATTGTGCCGAAGACATCGGCGGATGGGAAGCTGCTGCAGGAGATGATAC
TGGTGTGCGATGCGTACAGGAAGGATTTGCAGCATCCCAATGAGTTTCTG
CGCGGCTCGACACTGCGCTTCCTCTGCAAGCTGAAGGAGCCGGAGCTGCT
GGAGCCACTGATGCCGGCCATACGGGCGTGCCTGGATCACCGGCACTCGT
ATGTGCGACGAAATGCCGTGCTGGCCATCTTTACCATCTACAAGAACTTC
GATTGGCTGGTGCCCGATGGGCCGGAGCTGATTGCCAGCTTCCTGGACAC
GCAGCAGGACATGAGCTGCAAGCGCAACGCCTTCCTTATGCTACTGCATG
CGGACCAGGAGCGAGCGCTCAACTATCTGGCCAGTTGCATCGATCAGGTG
CACACTTTCGGCGATATACTGCAGCTGGTCATCGTGGAGCTGATCTATAA
GGTGTGCCATGCCAATCCCGCCGAGCGTTCGCGGTTCATACGCTGCATCT
ACAACCTGCTGAACTCCAGCTCGAATGCGGTGCGTTACGAGTCCGCTGGC
ACATTGATTACGCTCTCGCTGGCGCCCACGGCCATCAAGGCGGCGGCCAG
TTGCTACATCGAACTGGTGGTCAAGGAGAG
MXO03721.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:46:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6223-PA | 2895 | betaCop-RA | 1..872 | 9..880 | 4360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| betaCOP-RA | 3203 | CG6223-RA | 150..1021 | 9..880 | 4360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18384222..18385093 | 880..9 | 4360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:02:20 has no hits.
MXO03721.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:46:53 Download gff for
MXO03721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6223-PA | 1..872 | 9..880 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:12 Download gff for
MXO03721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaCop-RA | 95..974 | 1..880 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:27 Download gff for
MXO03721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaCOP-RA | 142..1021 | 1..880 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:27 Download gff for
MXO03721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18384222..18385101 | 1..880 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:12 Download gff for
MXO03721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18278255..18279134 | 1..880 | 99 | | Minus |
