MXO03725.5prime Sequence
600 bp (380 high quality bases) assembled on 2007-07-18
> MXO03725.5prime
CAATCGACATGTGGCGTCAAATCCTGCCTATTTTACCCACCCTGATACAG
GGGGTCCAGCGCTACAATCAGAGCCCCCTCGATGCGAGTCCGTATTATCG
CACCGGCGGGGGATTAATGGCCAGTTCTGGGACCGAACTAGATGGACTGC
CACATCACAATCGCTGTGAACCCATCACCATATCGATCTGCAAGAATATA
CCATATAACATGACCATTATGCCAAATCTTATTGGCCATACCAAGCAGGA
GGAGGCGGGTCTGGAGGTCCATCAGTTTGCTCCGCTCGTGAAGATCGGCT
GCAGTGATGACCTCCAGTTGTTCCTCTGTTCCCTGTACGTTCCGGTCTGC
ACAATTTTGGAGCGACCCATTCCGCCTTGTCGATCTCTGTGCGAACCGGC
GCGGGTATGTGAAAAGTTAATGAAAACCTACAACTTTAACTGGCCGGAAA
ATCTGGAGTGCTCCAAATTTCCCGTCCCTGGAGGCGAGGATTTGTGCAGT
GGCGGAGAATACCGCCTCATCGGTCTCCACAGCGGCCACGCCCACATGGA
GTGCGGGTAACGACACTACACGAAAACTTCAAACGGGAGTAGAAAGTCCG
MXO03725.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:47:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17697-PB | 1248 | fz-RB | 1..489 | 9..497 | 2295 | 98.7 | Plus |
| CG17697-PA | 1746 | fz-RA | 1..489 | 9..497 | 2295 | 98.7 | Plus |
| CG17697-PB | 1248 | fz-RB | 490..544 | 499..553 | 150 | 90.9 | Plus |
| CG17697-PA | 1746 | fz-RA | 490..544 | 499..553 | 150 | 90.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz-RC | 3817 | CG17697-RC | 713..1303 | 9..600 | 2620 | 96.3 | Plus |
| fz-RA | 3817 | CG17697-RA | 713..1303 | 9..600 | 2620 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14275055..14275645 | 9..600 | 2595 | 96.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:49:30 has no hits.
MXO03725.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:47:06 Download gff for
MXO03725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17697-PA | 1..591 | 9..600 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:01 Download gff for
MXO03725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz-RB | 709..1303 | 1..600 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:41:29 Download gff for
MXO03725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz-RA | 709..1303 | 1..600 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:41:29 Download gff for
MXO03725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14275051..14275616 | 1..572 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:01 Download gff for
MXO03725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14268151..14268716 | 1..572 | 96 | -> | Plus |
