MXO03727.5prime Sequence
763 bp (665 high quality bases) assembled on 2007-07-18
> MXO03727.5prime
CAGTCGACATGTCTCCAAAAGCGCTACCTGTGCGCGTCACGACAATGGAC
GCGGAACTGGAGTTCGCCATTCAGTCGACGACGACGGGCAAGCAATTGTT
TGACCAGGTGGTGAAGACGATCGGCCTGCGAGAGGTTTGGTTCTTTGGAC
TCCAGTACACCGACTCCAAGGGCGACTCCACATGGATCAAGCTGTACAAA
AAGGTGATGAACCAGGACGTGAAGAAGGAGAATCCCTTGCAGTTTAGGTT
CCGTGCCAAATTCTATCCCGAGGATGTGGCCGAGGAGCTGATCCAGGACA
TTACACTGCGTCTGTTCTACCTGCAGGTGAAGAATGCCATACTGACCGAC
GAGATCTATTGTCCGCCAGAGACATCCGTGCTGCTCTCCTCGTACGCCGT
CCAGGCGCGTCATGGTGACCACAATAAGACCACCCACACAGCCGGCTTTC
TGGCCAACGATCGCCTGCTGCCGCAGCGCGTCATCGACCAGCACAAGATG
TCCAAGGACGAGTGGGAGCAGTCGATTATGACCTGGTGGCAGGAGCATCG
CAGCATGCTGCGCGAGGATGCCATGATGGAGTATCTGAAGATCGCCCAAG
ACCTGGAGATGTACGGCGTTAACTACTTTGAGATCCGCAACAAGAAGGGC
ACGGATCTTTGGCTGGGCGTAGACGCACTGGGTCTGAACATTTACGAGCA
GGACGATAGGTTGACGCCGAAAATTGGTTTCCCCTGGTCCGAGATTCCCA
ACTTTTCGTTCTC
MXO03727.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:47:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10701-PE | 1728 | Moe-RE | 1..755 | 9..763 | 3625 | 99.2 | Plus |
| CG10701-PF | 1728 | Moe-RF | 1..755 | 9..763 | 3625 | 99.2 | Plus |
| CG10701-PG | 1728 | Moe-RG | 1..755 | 9..763 | 3625 | 99.2 | Plus |
| CG10701-PH | 1728 | Moe-RH | 1..755 | 9..763 | 3625 | 99.2 | Plus |
| CG10701-PI | 1728 | Moe-RI | 1..755 | 9..763 | 3625 | 99.2 | Plus |
| CG10701-PJ | 1737 | Moe-RJ | 1..755 | 9..763 | 3625 | 99.2 | Plus |
| CG10701-PD | 1728 | Moe-RD | 1..755 | 9..763 | 3625 | 99.2 | Plus |
| CG10701-PA | 1923 | Moe-RA | 381..941 | 203..763 | 2705 | 99.2 | Plus |
| CG10701-PB | 1950 | Moe-RB | 408..968 | 203..763 | 2705 | 99.2 | Plus |
| CG10701-PC | 1539 | Moe-RC | 1..557 | 207..763 | 2685 | 99.2 | Plus |
| CG10701-PA | 1923 | Moe-RA | 48..222 | 29..203 | 875 | 100 | Plus |
| CG10701-PB | 1950 | Moe-RB | 75..249 | 29..203 | 875 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Moe-RL | 2528 | CG10701-RL | 468..1222 | 9..763 | 3685 | 99.2 | Plus |
| Moe-RD | 3003 | CG10701-RD | 341..1095 | 9..763 | 3685 | 99.2 | Plus |
| Moe-RJ | 2401 | CG10701-RJ | 341..1095 | 9..763 | 3685 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8875301..8875862 | 763..202 | 2750 | 99.3 | Minus |
| X | 23542271 | X | 8876571..8876747 | 205..29 | 885 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:01:23 has no hits.
MXO03727.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:47:14 Download gff for
MXO03727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10701-PH | 1..755 | 9..763 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:01 Download gff for
MXO03727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Moe-RJ | 334..1095 | 1..763 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:05 Download gff for
MXO03727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Moe-RJ | 334..1095 | 1..763 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:05 Download gff for
MXO03727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8876573..8876752 | 24..203 | 98 | <- | Minus |
| X | 8875301..8875860 | 204..763 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:01 Download gff for
MXO03727.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8769334..8769893 | 204..763 | 99 | <- | Minus |
| arm_X | 8770606..8770785 | 24..203 | 98 | <- | Minus |
