MXO03735.5prime Sequence
786 bp (734 high quality bases) assembled on 2007-07-18
> MXO03735.5prime
CAGTCGACATGCGCTTGCTCAGGCCCCGCTGGGCGGGGTTGCTGCGCGGA
AGGCACCACCAGCACCAGCGACATCACCGGCGTCTCCTGCTGACCACCAG
TCGCGGTAGCAATGGAGAAAGGGAGGAGCAGCAGCACAGCCAATGGAGTT
CTCCCGGCAGCAGGTCGGAGCAACTGTTCTATGCTGCCTTTTGGGCAGGT
GGCCTGACCCTAGGCTACCACTGGCTGACCGACAAGAAGAACCATGTGCT
GCTCGAGGGACAGAAGGTGGCCAGCGAGGAGGAACTAGAGGCAACGGCCC
GACTGTGGCACGTGACCAACAGAAGGGAGTTGCCCACCTACAGGGCAGAA
GAAGTGGAGCAGCACAACAGCGTAGAGAAACGCATTTGGGTCACCTACGG
CCTGGGCGTATACGATGTCACGGACTTTGTCGAGAATCATCCCGGTGGCG
ATAAGATCTTGATGGCCGCCGGCAGTGCCATCGATCCCTTTTGGGGCATC
TACCAGCAGCACAATACGCTGGAGGTTCTGGAGCTCCTAGAGGGCTTTCG
CATTGGCAATCTGGAGGGACTGGTGGTGACCAACGTGGACGATGAGCTGG
GCTCACCCTGGTCACAGGAGCCGCAGCGCCACGCCCTGCTCAAGCCAGCC
TCCAAGAGACCATTCAACGCTGAGCCACCCATTGGATTGCTGGCCGAGCA
GTTTTACACGCCCAACGAGCTATTCTATGTGCGCAACCACCTGCCAGTGC
CAGTGATAAATCCGGAGGATTACGAGCTGGAAATCG
MXO03735.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:47:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7280-PA | 1722 | CG7280-RA | 1..778 | 9..786 | 3865 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7280-RA | 2115 | CG7280-RA | 279..1056 | 9..786 | 3875 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18847511..18848288 | 786..9 | 3875 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:02:41 has no hits.
MXO03735.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:47:46 Download gff for
MXO03735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7280-PA | 1..778 | 9..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:18 Download gff for
MXO03735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7280-RA | 272..1056 | 1..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:38 Download gff for
MXO03735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7280-RA | 272..1056 | 1..786 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:38 Download gff for
MXO03735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18847511..18848295 | 1..786 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:18 Download gff for
MXO03735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18741544..18742328 | 1..786 | 99 | | Minus |
