MXO03737.5prime Sequence
739 bp (689 high quality bases) assembled on 2007-07-18
> MXO03737.5prime
CAGTCGACATGAGCCTGAGGAAGTGCGGATACCGCCTGCTGCCGGGTCTA
AAGTGGCTGCACGGTTATACTGGCCAAGATGCAGTTGCGGATCTGATAGC
CGGAGTGACGGTCGGCCTGACGGTGTTGCCCCAAGGACTGGCCTACGCTA
CGCTGGCGGGACTGGAGCCCCAATATGGTCTGTACTCCGCCTTTGTGGGC
GGTATTATATACGCCATGCTGGGCAGCTGCCGGCAGGTGACCATTGGACC
CACGGCTTTGCTCGCACTGATGACAAGCCGGCACACGGGATTTGGACTGG
GATCGGGTCCAGCGTACGCGATACTTTTGTGCCTCATCTCTGGTGTTGTG
GAGCTGGGTATGGCAGTGCTGAAACTGGGTGCCCTGTTGGACCTGATATC
ACTGCCAGTTACCGTGGGATTCACCTCGGCCACCGCCGTCATCATTGGCA
CCTCGCAGCTAAAGGGTTTGCTGGGACTGCGTGGTGGATCCGGGTCTGAT
TTCATCAATACCATGCGCTCCGTGTTCGGAAATCTACACAAAGTTAGAAC
TGGTGATTTTACCCTTGGTTTGACTTCCATTATAGTTTTGCTACTTCTGC
GGAAACTAAAAGACGTTAAGCTGGATGGTCGAATCCGGAACTTGCGAACA
CAGCAGCTTGTAAGTGGTAGCATCTGGGTAATAGGCACCGGTCGGAATGC
GCTGGTCGTACTGGTGACCAGTGTGCTGGCCTACAGCAC
MXO03737.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:47:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6928-PB | 1839 | CG6928-RB | 1..731 | 9..739 | 3605 | 99.7 | Plus |
| CG6928-PA | 1839 | CG6928-RA | 1..731 | 9..739 | 3605 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6928-RD | 2432 | CG6928-RD | 151..882 | 8..739 | 3630 | 99.7 | Plus |
| CG6928-RC | 2445 | CG6928-RC | 164..895 | 8..739 | 3630 | 99.7 | Plus |
| CG6928-RA | 2323 | CG6928-RA | 164..895 | 8..739 | 3630 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12005264..12005858 | 8..602 | 2945 | 99.7 | Plus |
| 3L | 28110227 | 3L | 12005916..12006053 | 602..739 | 690 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:27:03 has no hits.
MXO03737.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:47:51 Download gff for
MXO03737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6928-PA | 1..731 | 9..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:49:50 Download gff for
MXO03737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6928-RA | 157..895 | 1..739 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:54 Download gff for
MXO03737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6928-RA | 157..895 | 1..739 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:54 Download gff for
MXO03737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12005257..12005858 | 1..602 | 99 | -> | Plus |
| 3L | 12005917..12006053 | 603..739 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:49:50 Download gff for
MXO03737.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11998357..11998958 | 1..602 | 99 | -> | Plus |
| arm_3L | 11999017..11999153 | 603..739 | 100 | | Plus |
