MXO03740.5prime Sequence
388 bp (386 high quality bases) assembled on 2007-07-18
> MXO03740.5prime
CAATCGACATGGTTGACTACTATAAACCTTTGAATGTTTCGCGATCCGCT
ACCGATAGTGAAGTGAAGAAGGCATATCGAAAACTGGCACTAAAATGGCA
CCCACACAAGAATCCCGACAACCTGGATGAGGCCAACAAACGCTTCCGCG
AGCTGTCCGAAGCCTACGAAGTTCTTTCCGATGAGAAAAAGCGTCGCATA
TACGATGAGTATGGCAAAGATGGACTGGGCGATCGTGGCCAGAGTCGCTC
GCATGCCCGCCACCATTATAGCACACACGATTTCGATGACTTCGATATTT
TGGGCGGCTTTCAGTTTGCATTCCGCCCGCCCGAGGAAGTGTTCCGTGAG
TTCTTCGGCATCCACTCGCCCTTCGCCGACTTATTTTT
MXO03740.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:48:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8448-PD | 780 | mrj-RD | 1..377 | 9..385 | 1785 | 98.9 | Plus |
CG8448-PB | 780 | mrj-RB | 1..377 | 9..385 | 1785 | 98.9 | Plus |
CG8448-PC | 780 | mrj-RC | 1..377 | 9..385 | 1785 | 98.9 | Plus |
CG8448-PA | 780 | mrj-RA | 1..377 | 9..385 | 1785 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mrj-RA | 1929 | CG8448-RA | 180..558 | 7..385 | 1835 | 98.9 | Plus |
mrj-RC | 2143 | CG8448-RC | 394..772 | 7..385 | 1835 | 98.9 | Plus |
mrj-RB | 2126 | CG8448-RB | 377..755 | 7..385 | 1835 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16204830..16205032 | 385..183 | 1015 | 100 | Minus |
2R | 25286936 | 2R | 16205710..16205819 | 183..74 | 535 | 99.1 | Minus |
2R | 25286936 | 2R | 16205901..16205967 | 73..7 | 290 | 95.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:49:37 has no hits.
MXO03740.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:48:13 Download gff for
MXO03740.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8448-PA | 1..377 | 9..388 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:05 Download gff for
MXO03740.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mrj-RB | 372..755 | 1..388 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:41:33 Download gff for
MXO03740.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mrj-RB | 372..755 | 1..388 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:41:33 Download gff for
MXO03740.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16204827..16205031 | 184..388 | 98 | <- | Minus |
2R | 16205710..16205819 | 74..183 | 99 | <- | Minus |
2R | 16205901..16205972 | 1..73 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:05 Download gff for
MXO03740.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12092332..12092536 | 184..388 | 98 | <- | Minus |
arm_2R | 12093215..12093324 | 74..183 | 99 | <- | Minus |
arm_2R | 12093406..12093477 | 1..73 | 91 | | Minus |