MXO03743.5prime Sequence
884 bp (783 high quality bases) assembled on 2007-07-18
> MXO03743.5prime
CAGTCGACATGAAGTCGAACGGCTTCTTTGTTTCTCGTTTAAAACAACCA
AATATTGCTCCAACACTTCCAGTACTTTCTCCACATTCACCAATGAATGC
TAATATACATATAAATAGCCAGCATACCCAACTTTCCGGTCGATATCTAA
ATAACAAAGTGTCCCAACAAATCGACACTGAAAGTATAAAAAGAGTGGCA
TCTAACCGATCTCTAAAGGACAGTCAAAACGTCTTATCCATTTCATCAAC
TCTAATATGCAACTGCGAGAAGGCCCAAAAATCGAATGGCTCAGAAGCGG
AAGCAAACGAAGAAATCAAAATTAAACTGAGCTCAGATACTGGTAACAAA
TCTACCATTAGTAAATTAAAAGACCCGAAACTCTCTTCAGCGTCGGAAAA
AAACGCATTAGATAATTCAACCGAGGGTTGTTTGCAATTGAAAAGTGTAA
TTGGAAAGGAGCAAAAATCGCTGTCTCCGAGACTGACGTTACACAAGAGT
GGGTTTCAACAGGCCATCATAATTTCCGACGACAGTGAGAACACGAAGTC
TTCGCGATTAGGTACCCAAACAGCAAGGCAGCTCTCCAGTAATTCAGACA
ATCAATTTTATCGACAGCTTACCCATAAGATTAGCAAATCGGAGCAAACT
TCCCCAAACAACTTGGAGCTAGACAAAGCTAACTTTCTCTACGATACGAA
CAATAGGAGTACGGGCTGTTTGGTGTATCCTTCGGATCCATGGATAAAGA
ACTCGCATATTAAGAACAGCTTGTCCCCCAAAACGGAAAAGTATTCAAAC
ACCATGCATCACAATATCGATCCGTGGGTCAAGAGACAAACAGATGCTGC
TGTGGAAATCTCACGGCTTCCCAAGAAAAATTTC
MXO03743.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:48:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33095-PA | 1617 | CG33095-RA | 1..876 | 9..884 | 4380 | 100 | Plus |
| CG33095-PB | 1617 | CG33095-RB | 1..876 | 9..884 | 4380 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33096-RG | 3581 | CG33096-RG | 1561..2440 | 5..884 | 4385 | 99.9 | Plus |
| CG33096-RF | 3465 | CG33096-RF | 1445..2324 | 5..884 | 4385 | 99.9 | Plus |
| CG33095-RB | 3581 | CG33095-RB | 1561..2440 | 5..884 | 4385 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25100126..25101005 | 5..884 | 4385 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:30:50 has no hits.
MXO03743.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:48:22 Download gff for
MXO03743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33095-PB | 1..876 | 9..884 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:00 Download gff for
MXO03743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33095-RA | 131..1014 | 1..884 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:35 Download gff for
MXO03743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33095-RB | 1557..2440 | 1..884 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:35 Download gff for
MXO03743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25100122..25101005 | 1..884 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:00 Download gff for
MXO03743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20925844..20926727 | 1..884 | 99 | | Plus |
