MXO03744.5prime Sequence
855 bp (803 high quality bases) assembled on 2007-07-18
> MXO03744.5prime
CAGTCGACATGGCCAGCGATATTCCACCTTCAGCCATCCGTATTTGGATG
GACAAGCTGAAAAAGGGCGTTGGGCAGCCGGCGACAGTCCTAGAGCGTTC
CCTGCTCAATTTAATGAGTGCAGAAGCAGCCAGTTTATCGGTGAAAAATG
CCACGGAGCGAGGCATACTGGTGGCCAGAGCAGGCGGCGGACGGTCCAAG
CGTCTGGCCCTCGCCTTTTGTCAAAAAGTAAGCCGGCTGCCCAGCTCACC
AATTGATCCGTTCTGCTTCGAGTGCCATTTGCCCGGAGCCGTTAAGAAAT
GCATATCCTGCCATCGCTCCTTCCACGAGAATTGCCAGCGACAGGACCCG
GAGAAGCCCAATTATTCAGTGCCCTCGGACAAGGGCCAACCTTACCAGTT
TCCCGTCAACGAATTGGACAATCAGCCCCTGAATAACACTCAGAACTTGG
AGACTCCCCAAACGCCAACGCCCCTGCTCGATCATAATAGCAACATCAAT
CAGACTTTGCTAGCCACTACGGATTTCCTGAAGCACGAGAACATCGAGTG
GGACGACGACGTCTTCTTTGTGTGCGAACAAAAGGGCGCGCGCCAGCGAA
AGCTGCCCAGGATCAAGGACGAACTACAAAGCAGTTTGGATAGCGATGAG
GGAAGCGATCTGGAGCGCTGCACCCACTGCCGTTTGCTCGCCCTGGCCGC
TCTCCACAACCCACCGCAACTCGACAAGCAAGAGCTGGGCTGCCTATTGA
AGTACTCCTGGGACCAGCATCACTCCTGGATCTCCATGGATGTGGCCAAG
TACATGGGCAAGCATTGGAACGAACGCGACAAGGCGCTGGTTAAGCGGCT
ACTCT
MXO03744.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:48:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8569-PA | 1827 | CG8569-RA | 1..847 | 9..855 | 4210 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:02:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8569-RA | 2334 | CG8569-RA | 68..914 | 9..855 | 4220 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:02:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12519410..12520144 | 121..855 | 3660 | 99.9 | Plus |
| 2R | 25286936 | 2R | 12519233..12519347 | 9..123 | 575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:02:17 has no hits.
MXO03744.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:48:28 Download gff for
MXO03744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8569-PA | 1..847 | 9..855 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:50 Download gff for
MXO03744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8569-RA | 60..914 | 1..855 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:27 Download gff for
MXO03744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8569-RA | 60..914 | 1..855 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:27 Download gff for
MXO03744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12519225..12519347 | 1..123 | 96 | -> | Plus |
| 2R | 12519413..12520144 | 124..855 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:50 Download gff for
MXO03744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8406730..8406852 | 1..123 | 96 | -> | Plus |
| arm_2R | 8406918..8407649 | 124..855 | 99 | | Plus |
