MXO03747.5prime Sequence
867 bp (831 high quality bases) assembled on 2007-07-18
> MXO03747.5prime
CAGTCGACATGGCCGCGAAGCCCGAGCATAAGAGCACGGATATTCCGGAT
CGCCTCGTCGACATCAACCAGCGGAAAACCTACAAGCGCATGCGGTTCTT
CGGCAAGGGCGGGTTTGCAAAATGTTACGAGATCATCGATGTGGAAACCG
ACGACGTCTTCGCCGGCAAGATCGTATCCAAGAAGCTGATGATCAAACAC
AATCAGAAGGAGAAGACCGCCCAGGAGATAACTATTCACCGCAGCCTTAA
CCATCCGAACATTGTCAAGTTTCACAACTACTTTGAAGATTCGCAGAATA
TCTACATTGTGCTGGAGCTGTGCAAGAAAAGATCCATGATGGAGCTGCAC
AAACGTAGGAAAAGCATTACGGAGTTCGAATGCCGCTACTACATTTACCA
GATAATCCAGGGCGTTAAGTACTTGCACGATAACCGCATTATCCATCGAG
ATCTGAAGCTGGGCAATCTCTTCCTCAACGATTTGTTGCACGTGAAGATC
GGGGATTTCGGGTTGGCCACGCGCATTGAGTATGAGGGCGAGCGAAAAAA
GACCTTATGCGGAACGCCCAACTATATAGCCCCGGAGATCCTCACCAAGA
AGGGCCACTCCTTCGAGGTGGACATCTGGTCGATTGGCTGCGTCATGTAC
ACACTGCTTGTGGGCCAGCCGCCGTTCGAAACCAAGACTCTGAAGGATAC
GTACTCGAAAATCAAGAAGTGCGAGTACCGCGTGCCCAGCTACTTAAGGA
AACCGGCGGCGGATATGGTCATCGCCATGCTGCAGCCAAATCCGGAGAGC
CGCCCGGCAATTGGTCAGCTGCTGAACTTTGAGTTTCTTCAGGGCTCAAA
GGTGCCCATGTTCTTGC
MXO03747.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:48:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12306-PA | 1731 | polo-RA | 1..859 | 9..867 | 4195 | 99.5 | Plus |
CG12306-PB | 1731 | polo-RB | 1..859 | 9..867 | 4195 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
polo-RB | 2324 | CG12306-RB | 264..1122 | 9..867 | 4235 | 99.5 | Plus |
polo-RA | 2980 | CG12306-RA | 657..1515 | 9..867 | 4235 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20311335..20311869 | 333..867 | 2630 | 99.4 | Plus |
3L | 28110227 | 3L | 20311047..20311273 | 106..332 | 1135 | 100 | Plus |
3L | 28110227 | 3L | 20310310..20310409 | 9..108 | 485 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:02:52 has no hits.
MXO03747.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:48:44 Download gff for
MXO03747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12306-PB | 1..859 | 9..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:22 Download gff for
MXO03747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
polo-RA | 650..1515 | 1..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:43 Download gff for
MXO03747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
polo-RA | 650..1515 | 1..867 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:43 Download gff for
MXO03747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20311335..20311869 | 333..867 | 99 | | Plus |
3L | 20310303..20310408 | 1..107 | 95 | -> | Plus |
3L | 20311049..20311273 | 108..332 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:22 Download gff for
MXO03747.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20303403..20303508 | 1..107 | 95 | -> | Plus |
arm_3L | 20304149..20304373 | 108..332 | 100 | -> | Plus |
arm_3L | 20304435..20304969 | 333..867 | 99 | | Plus |