MXO03751.5prime Sequence
851 bp (803 high quality bases) assembled on 2007-07-18
> MXO03751.5prime
CAGTCGACATGTCTATTAACCTGCGCACCGTCTACGCCTTCGCCCGCGAG
ATGTACCCAAAGACCTCCAAGGAGACCATCCAATATGGAACAGCTGGCTT
TCGCGGCAAGGCTGAGTTCCTGGACAGCGTGATGTTCCGCATGGGCGTTC
TGGCCACCCTGCGTTCCCGGTATCGCGGAGGCTCCGTCATCGGTGTGATG
ATCACGGCATCGCACAATCCGGAGCCGGACAACGGAGTGAAGCTGGTCGA
TCCCAAGGGCGAGATGCTGGAGGCCAGCTGGGAGGCGATAGCCACCGATC
TGGTCAACGTCAGCGACCAGGAGCTGGAGCAGCAGGTGGCCAAGATCATA
AAGGACAACAATATCGATGTGACGACCAGTTCCCAGGTGTTTGTGGGCAT
GGACAACAGATACCACAGTCCGCGGCTGCTGAAAGCGGTGGCCGATGGCG
TGATAGCGCTAAAGGGTAACGTCAAGGAGTACGGCATTGTGACCACACCC
ATGCTGCACTACTTCGTGGTGGCGGCGAATACCAAGGAGGCATACGGCAA
GCCCACCGAGGAGGGTTACTACGACAAGCTGATCAAGGCATTCGAACTGC
TGCGCAACGGGCGCCTGGAGAACGGCAACTATCGCAATAGCATCATCTAC
GATGGTGCCAACGGTGTGGGTGCGCGCAAGATGCTGCAGTTCATCAAGCG
CATGAAGGGCACCCTCAACGTGACGGTCATTAATCAGGGCATCGGTGTCG
GCAAGATCAACGAGGACTGCGGCGCCGACTACGTGAAGGTGCAGCAAAGT
CCGCCGAAATCCATGCCCGAAGATGTGAAGCCGTACACGAGATGCGTCAG
C
MXO03751.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:49:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10627-PA | 1650 | CG10627-RA | 1..843 | 9..851 | 4190 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nst-RA | 2202 | CG10627-RA | 137..979 | 9..851 | 4200 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12528507..12529248 | 851..110 | 3695 | 99.9 | Minus |
| 3L | 28110227 | 3L | 12529934..12530035 | 110..9 | 510 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:22:59 has no hits.
MXO03751.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:49:10 Download gff for
MXO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10627-PA | 1..843 | 9..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:42 Download gff for
MXO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nst-RA | 131..979 | 1..851 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:52 Download gff for
MXO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nst-RA | 131..979 | 1..851 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:52 Download gff for
MXO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12528507..12529248 | 110..851 | 99 | <- | Minus |
| 3L | 12529935..12530041 | 1..109 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:42 Download gff for
MXO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12521607..12522348 | 110..851 | 99 | <- | Minus |
| arm_3L | 12523035..12523141 | 1..109 | 96 | | Minus |
