MXO03753.5prime Sequence
818 bp (739 high quality bases) assembled on 2007-07-18
> MXO03753.5prime
CAGTCGACATGTCCACCTTTAACTTCCCCAGCATGGCCGCCCAACTGGGC
CAGGAGCAGGGAATATCATTCGAGAACAAGGTGCTTTCCTGGAACACAGC
TGCCGATGTCCAGGATGTGGTGGATGCCCTTAACAAACAGACCACCGTGC
ACTATCTGAATCTGGACGGGAACACACTGGGCGTTGAGGCCGCCAAGGCG
ATTGGTGAGGGTCTGAAGCGTCATCCAGAGTTTCGGAAGGCGCTGTGGAA
GAACATGTTTACTGGTCGTCTCATATCGGAGATTCCGGAGGCACTCAAGC
ACCTGGGAGCCGCGCTAATTGTCGCGGGCGCCAAACTGACAGTCCTGGAT
CTCAGCGACAATGCCTTAGGACCGAATGGCATGCGAGGCTTAGAGGAGTT
ACTGCGATCCCCGGTCTGCTACTCGCTGCAGGAGCTGCTGCTGTGCAATT
GTGGCCTTGGTCCCGAGGGCGGTAGTATGCTGTCCCGGGCTCTGATCGAT
CTGCATGCCAATGCCAACAAGGCGGGCTTCCCGCTCCAGCTGCGTGTGTT
CATAGGTTCGCGCAATCGTCTCGAGGATGCCGGTGCTACGGAAATGGCAA
CCGCATTCCAAACCCTCAAGACCTTCGAGGAGATTGTTCTGGAGCAAAAC
TCCATTTACATCGAAGGCGTCGAGGCCCTTGCCGAATCCTTCAAGCATAA
TCCTCATCTACGAGTGCTAAACATGAACGACNATACTCTAAAGTCCGAGG
GAGCTGAAAAATAGCTGAGGCTCTTCCCTTCTTGCCACTGCTGCGTGAAA
TGAGCTTTGGAGACTGCC
MXO03753.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:49:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9999-PA | 1791 | RanGap-RA | 1..753 | 9..761 | 3721 | 99.7 | Plus |
| CG9999-PA | 1791 | RanGap-RA | 750..811 | 757..818 | 310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RanGAP-RB | 2008 | CG9999-RB | 138..949 | 8..818 | 4009 | 99.6 | Plus |
| RanGAP-RA | 2401 | CG9999-RA | 531..1342 | 8..818 | 4009 | 99.6 | Plus |
| RanGAP-RC | 2144 | CG9999-RC | 298..1085 | 32..818 | 3904 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19445344..19446027 | 108..790 | 3359 | 99.7 | Plus |
| 2L | 23513712 | 2L | 19445185..19445285 | 8..108 | 490 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:36 has no hits.
MXO03753.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:49:20 Download gff for
MXO03753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9999-PA | 1..811 | 9..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:24 Download gff for
MXO03753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RanGAP-RA | 524..1342 | 1..818 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:30 Download gff for
MXO03753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RanGAP-RA | 524..1342 | 1..818 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:30 Download gff for
MXO03753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19445178..19445285 | 1..108 | 95 | -> | Plus |
| 2L | 19445345..19446026 | 109..789 | 99 | -> | Plus |
| 2L | 19446097..19446125 | 790..818 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:24 Download gff for
MXO03753.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19445178..19445285 | 1..108 | 95 | -> | Plus |
| arm_2L | 19445345..19446026 | 109..789 | 99 | -> | Plus |
| arm_2L | 19446097..19446125 | 790..818 | 100 | | Plus |
