MXO03754.5prime Sequence
724 bp (475 high quality bases) assembled on 2007-07-18
> MXO03754.5prime
CAGTCGACATGGAGAGCCGCAGCGACCTCCATCGCCAGTTGGCAGCCTCG
CTAACGGATGAGCTGGTCAAGCCGCTCAAGATCGTCGTCGAAGGACATCA
CAAGGCGCGCAAGGCGGTGGAAAGCAACGTGGACAAGGCGGCGCGAGTAC
TGGGCGAATGGCGAGCCAGCGAGGCGAAAGCCAAGAAGGCCTCCCATACG
GCGGCGCGCGAGAACGAGAAGCTGCAGGACGCAATGCTGGACGTGCGCAT
CCAGAAGTCACCATCGATTGCCCTGCTCCACCAGGGACCCAACAAGCAGG
CCGCAGAAAAGGAGCTCAAGTCAGCGGAGAAGGATTGCGTCAAGCTGGAT
AACAAGCGCAAGAAGGCCGAGGAGGCGGTGAAGCGTGCGGATGTGGAATA
CTACACCCTGTGCGTGCGTTCGGAGCGAGCACGCGTAAACTGGGAGATGG
CCGTGCTCCGGGGAAGTGCCCAACTGCAGAGCACCGAACAGCAGCGGCTG
AGGAATATGCACAACTTTGCCCAGCAGTATGCACGCCTCATCTCGGACAT
GAATCCGATACTCGGAGGCCTGAGCACACGCCTGCAGCCGCAACTCGATG
CTTGCAATGTGGATAATGATATGCAAGTGGTGCGCCAAATCCGCCGCAAT
TCGCAGGGACCCAGTGAGCAACTCCTACCGGACTTTTACTGCTAACACTC
CACGCTGGGCATGAATCGGGAGCG
MXO03754.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:49:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4040-PA | 1797 | CG4040-RA | 1..716 | 9..724 | 3255 | 98.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42388-RG | 5133 | CG42388-RG | 2039..2754 | 9..724 | 3385 | 98.2 | Plus |
| CG42388-RD | 2735 | CG42388-RD | 897..1612 | 9..724 | 3385 | 98.2 | Plus |
| CG42388-RC | 3014 | CG42388-RC | 1176..1891 | 9..724 | 3385 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9051467..9052075 | 116..724 | 2865 | 98 | Plus |
| X | 23542271 | X | 9051303..9051412 | 9..118 | 535 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:44:11 has no hits.
MXO03754.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:49:25 Download gff for
MXO03754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4040-PA | 1..716 | 9..724 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:24 Download gff for
MXO03754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42388-RC | 1171..1891 | 1..724 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:33 Download gff for
MXO03754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42388-RC | 1171..1891 | 1..724 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:33 Download gff for
MXO03754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9051298..9051410 | 1..116 | 95 | -> | Plus |
| X | 9051468..9052075 | 117..724 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:24 Download gff for
MXO03754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8945331..8945443 | 1..116 | 95 | -> | Plus |
| arm_X | 8945501..8946108 | 117..724 | 98 | | Plus |
