MXO03759.5prime Sequence
854 bp (818 high quality bases) assembled on 2007-07-18
> MXO03759.5prime
CAGTCGACATGCCGGACATCAAGATAACGCCCTTGGGCGCCGGCCAGGAT
GTGGGCCGCAGCTGTCTGCTGCTCTCGATGGGCGGGAAGAACATAATGCT
CGACTGCGGGATGCATATGGGCTACAACGACGAGCGCCGCTTCCCGGACT
TCTCCTACATAGTGCCGGAGGGTCCGATCACCAGCCACATTGACTGTGTG
ATCATCTCGCACTTCCACCTGGATCACTGCGGGGCCTTGCCCTACATGTC
AGAGATTGTGGGCTACACGGGGCCCATCTACATGACGCATCCGACCAAGG
CCATAGCACCCATCCTCCTGGAGGACATGCGGAAGGTGGCCGTAGAGCGG
AAAGGCGAGTCGAACTTCTTTACCACCCAGATGATCAAGGACTGCATGAA
GAAGGTGATTCCCGTCACACTTCACCAGAGTATGATGGTGGACACGGACC
TTGAGATCAAAGCCTACTATGCAGGCCATGTCCTGGGCGCCGCCATGTTC
TGGATCAAGGTGGGCTCCCAGAGCGTTGTCTACACGGGGGACTACAACAT
GACTCCAGACAGGCATCTGGGAGCCGCCTGGATAGACAAGTGCCGGCCGG
ACTTGCTGATCTCCGAGAGCACCTACGCCACTACCATTAGGGACTCGAAG
CGGTGTCGCGAGAGGGACTTCCTCAAGAAAGTTCACGAGTGCGTGGCTAA
GGGCGGCAAGGTTTTAATCCCTGTTTTTGCCCTGNGTCGCGCCCAGGAGC
TGTGCATCCTGCTGGAGACGTACTGGGAGCGCATGAACCTCAAGTACCCC
ATATACTTTGCTCTGGGTCTTACCGAGAAAGCCAATACCTACTACAAAAT
GTTC
MXO03759.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:49:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1972-PA | 1794 | CG1972-RA | 1..846 | 9..854 | 4186 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS11-RA | 2043 | CG1972-RA | 134..979 | 9..854 | 4204 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29745762..29746394 | 222..854 | 3139 | 99.7 | Plus |
| 3R | 32079331 | 3R | 29745470..29745683 | 9..222 | 1070 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:23:19 has no hits.
MXO03759.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:49:41 Download gff for
MXO03759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1972-PA | 1..846 | 9..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:49 Download gff for
MXO03759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS11-RA | 129..979 | 1..854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:03 Download gff for
MXO03759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS11-RA | 129..979 | 1..854 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:03 Download gff for
MXO03759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29745465..29745683 | 1..222 | 98 | -> | Plus |
| 3R | 29745763..29746394 | 223..854 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:49 Download gff for
MXO03759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25571187..25571405 | 1..222 | 98 | -> | Plus |
| arm_3R | 25571485..25572116 | 223..854 | 99 | | Plus |
