MXO03760.5prime Sequence
812 bp (784 high quality bases) assembled on 2007-07-18
> MXO03760.5prime
CAGTCGACATGTTAAGCAAAATGGCTACCAACACAAGCGGCGGGGGAGGT
ACCACTTCAGGCACTGGAACGGGACGTCGTCTGCCACTCTCGCTGAGCGG
CGGTTCCACCGTCACGCGCTTGCAGCAATCTTCTGGCAGCAACGGCCGCT
CAAATAGCCCCCAAAATGGGAACAAAAAGATCACAGAGTCATTTTTGCCG
GTAAAAAAGAGCAACCAACCGCGGACCACTTCGACTGGATCCACCGGATC
CAGCCAGAACGGCGTAAGCAAGCCCACAAATGGCAAAGATAAGTCACAGA
ATGGCAGCTCAACAGGCAAAGACCAGAAGGTAGAGAAATCTAAAGATAAG
TTGCCGGAAAAGAAGGCAAAGGAAGTGGGTGCCGAGAATAAGGATAAGGA
TGGCGCTGCCGAGATGACAGATATGGAGGTTGTGGTCGAAAATAAGCAAA
AGGAGGTGGTATCCGAAAATAAGCAAAATGAGGTGGTATCTGAAAATAAG
GAAGTGGTATCTGAAAATAAGGAGGTGGTATCCGAAAATAAGGAGGTGGC
TTCCGAAAAAAAGGTGGTGGTAGCTGAAGTTCCCTCCGACAAAGACGACA
ACGGAGAGACCAAAAAAGATGATGCTACCGTTGAGAGTACTGCTCCTGCT
TCTCAAACGCCTGCGGATGCTGCGGTAATCATCGATGAAGTAGTGTTTAT
TCCCGATCTCAGCACTCCTACTAAGGATCGCAAGTCTACACGCAAGTCGG
GTAACCAGCAAAAGTCACCCATCAGCAAGGCAAGCAACGCTTCGCCTGTC
CAGAAGATAAAA
MXO03760.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:49:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5175-PA | 1713 | kuk-RA | 1..804 | 9..812 | 3970 | 99.7 | Plus |
| CG5175-PB | 1713 | kuk-RB | 1..804 | 9..812 | 3970 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kuk-RC | 2200 | CG5175-RC | 116..919 | 9..812 | 3990 | 99.8 | Plus |
| kuk-RB | 2238 | CG5175-RB | 154..957 | 9..812 | 3990 | 99.8 | Plus |
| kuk-RA | 2231 | CG5175-RA | 147..950 | 9..812 | 3990 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17082697..17083500 | 9..812 | 3990 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:03:06 has no hits.
MXO03760.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:49:49 Download gff for
MXO03760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5175-PB | 1..800 | 9..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:27 Download gff for
MXO03760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kuk-RA | 141..946 | 1..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:48 Download gff for
MXO03760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kuk-RA | 141..946 | 1..808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:48 Download gff for
MXO03760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17082691..17083496 | 1..808 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:27 Download gff for
MXO03760.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12908413..12909218 | 1..808 | 99 | | Plus |
