Clone MXO03763 Report

Search the DGRC for MXO03763

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:37
Well:63
Vector:pMK33-CTAP-BD
Associated Gene/Transcriptns4-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO03763.5prime Sequence

384 bp (381 high quality bases) assembled on 2007-07-18

> MXO03763.5prime
CAGTCGACATGCCACAGCAACGGCGCCAGGTGGCCTTTAGCGGCAAGAAG
AAGAAGGACCAGATGTTGCAAAAGCGCAACACAAAAGGTCCCCCAAAGTA
TCTCAGGAGCACGCAGGAGTCGTATGAGGACAGCGATGTGCCGGAAACGA
CCAGGAAACTCATGGAGCAGCCTTTTGCGCGCGGCGGAAACCGAAACAAG
AACGTCAATCGCTATAATTTGCAATTCTACCAGGAGGGCAAAAAGGAACT
GGAGCAAATGAAACAAGAGGGCTTTAAACCGTTCGAGAAACTCAGTCCCG
CTCAGCGGGAAGTGGACGACCGATACTTTGCCGGCTGCGACTTCCCAGTT
CGTCCACCTTGGACGCTAACGGAGTCCAAGGAAG

MXO03763.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:50:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG9320-PA 1728 CG9320-RA 1..376 9..384 1830 99.4 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:02:22
Subject Length Description Subject Range Query Range Score Percent Strand
Ns4-RA 1961 CG9320-RA 137..512 9..384 1850 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:02:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20752779..20753077 86..384 1480 99.7 Plus
2L 23513712 2L 20752612..20752692 9..89 390 98.8 Plus
Blast to na_te.dros performed on 2014-11-28 22:02:21 has no hits.

MXO03763.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:50:04 Download gff for MXO03763.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9320-PA 1..376 9..384 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:53 Download gff for MXO03763.5prime
Subject Subject Range Query Range Percent Splice Strand
Ns4-RA 137..512 9..384 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:28 Download gff for MXO03763.5prime
Subject Subject Range Query Range Percent Splice Strand
Ns4-RA 137..512 9..384 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:28 Download gff for MXO03763.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 20752612..20752690 9..87 98 -> Plus
2L 20752781..20753077 88..384 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:53 Download gff for MXO03763.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20752612..20752690 9..87 98 -> Plus
arm_2L 20752781..20753077 88..384 99   Plus