MXO03764.5prime Sequence
710 bp (698 high quality bases) assembled on 2007-07-18
> MXO03764.5prime
CAGTCGACATGGCCGAGACCGAGAAACTCGAGGTTCGCGACGTGACTCGC
ATCGAGCGCATTGGCGCCCATTCGCATATCCGCGGATTGGGACTGGACGA
TGTGCTGGAGGCTCGTCTGGTATCCCAGGGAATGGTGGGCCAGAAGGACG
CGCGCCGTGCCGCCGGCGTTGTGGTGCAGATGGTTCGCGAGGGCAAGATC
GCCGGAAGATGTATCCTATTGGCCGGGGAGCCTAGTACCGGCAAAACGGC
CATTGCTGTGGGAATGGCGCAGGCTCTGGGCACCGAGACCCCATTCACTA
GCATGTCCGGATCGGAGATATACTCGCTGGAGATGAGCAAGACCGAGGCT
CTGTCACAGGCACTGCGCAAGAGCATTGGCGTTCTTTTCAAGGAGGAAAC
CGAGATCATCGAGGGCGAAGTGGTGGAGATCCAGATCGAACGCCCCGCCT
CGGGTACCGGACAGAAGGTGGGCAAGGTCACCCTCAAGACCACCGAGATG
GAAACCAACTACGATCTGGGCAACAAGATCATCGAGTGCTTCATGAAAGA
GAAGATCCAGGCTGGCGATGTGATCACCATCGACAAGGCGTCCGGAAAGG
TCAACAAGCTGGGTCGCAGCTTCACCAGAGCCAGGGACTACGACGCCACT
GGCGCTCAGACCAGATTCGTCCAATGCCCCGAGGGTGAGCTTCAAAAACG
CAAGGAGGTG
MXO03764.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:50:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9750-PA | 1446 | rept-RA | 1..376 | 9..384 | 1855 | 99.7 | Plus |
| CG9750-PA | 1446 | rept-RA | 380..702 | 388..710 | 1615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rept-RB | 1707 | CG9750-RB | 176..877 | 9..710 | 3450 | 99.4 | Plus |
| rept-RC | 1714 | CG9750-RC | 118..819 | 9..710 | 3450 | 99.4 | Plus |
| rept-RA | 1772 | CG9750-RA | 176..877 | 9..710 | 3450 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19255515..19256216 | 9..710 | 3450 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:19:03 has no hits.
MXO03764.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:50:09 Download gff for
MXO03764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9750-PA | 1..702 | 9..710 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:43 Download gff for
MXO03764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rept-RA | 170..877 | 1..710 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:54 Download gff for
MXO03764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rept-RA | 170..877 | 1..710 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:54 Download gff for
MXO03764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19255509..19256216 | 1..710 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:43 Download gff for
MXO03764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19248609..19249316 | 1..710 | 98 | | Plus |
