MXO03765.5prime Sequence
745 bp (642 high quality bases) assembled on 2007-07-18
> MXO03765.5prime
CAGTCGACATGGACAAAATCAAGTTACAGGTTATTGGCGTGCTGCGCGAA
CGCGATGGTGGAAATCGTAGTGGTTCTGGAGGATTGGGGGCAAGTGCTGG
ACCAGGAGCTGGATCTGGCGGAGTTACGGCAACAGCAGGCCATCAGTTGG
CCTCCGCAGGAGGAGCGGGCGTGGCGCAGCCCTCGATTGGGGTCACACAG
GATAATAACAACGAAGGCAACGCCCCGGGAGGTGGAGGAGCAGTAATCGA
ACCCCAGGCAACGGGAGGAGCCGCCGGACCATCTGGTGGAGTTGGTGGCG
CCGCTAGAACATCGGTGCTATCCAGACCGCAGACCTCCAAGATTAGCGCT
CTAGACCTGGCCGGTATACTCAACACGCGGAGAATATTCTAGTGCACCAA
GGAGTGGCTGCGCAAAAACCAGACCGAGTTTCTCAGCAAGGAGAATTTAC
TTAGTGAACTGCAGTCGCGCAAGGATGAGTGCTATCACTTGAATTACTTT
CTAGCCATAACAGAGAGCCAGTTTCGGTATCTAGTGCAAAAGCTGGAGCC
CATCATTAGCCAGTATGCTCCGCAACGCAAGAAGAAGTCCTTCAGCGCCG
AGGAACGACTGGCCATAACGCTCAAGTATTTGGCAACGGGTGAAGTACAT
TCTTGTCGAAACTACTGCTTCCGTGCCTCGAAATTTGTGAAAAACGAAAT
GATTGCCAATATCTGTCTGGGCTTCTACCAGCACCTCAAGGACCA
MXO03765.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:50:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7492-PA | 1722 | CG7492-RA | 1..737 | 9..745 | 3485 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7492-RA | 2674 | CG7492-RA | 508..1245 | 8..745 | 3570 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7653459..7654092 | 641..8 | 3080 | 99.1 | Minus |
| 3L | 28110227 | 3L | 7653295..7653401 | 745..639 | 505 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:40:12 has no hits.
MXO03765.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:50:14 Download gff for
MXO03765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7492-PA | 1..736 | 9..744 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:04 Download gff for
MXO03765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7492-RA | 502..1244 | 1..744 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:54 Download gff for
MXO03765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7492-RA | 502..1244 | 1..744 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:54 Download gff for
MXO03765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7653296..7653400 | 640..744 | 98 | <- | Minus |
| 3L | 7653461..7654098 | 1..639 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:04 Download gff for
MXO03765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7646396..7646500 | 640..744 | 98 | <- | Minus |
| arm_3L | 7646561..7647198 | 1..639 | 98 | | Minus |
