MXO03770.5prime Sequence
783 bp (780 high quality bases) assembled on 2007-07-18
> MXO03770.5prime
CAGTCGACATGCTGATGTTATTCGTACTGGAACTGCTGGTTCTACTGGCC
AGTTCATCGGTCCTCTCCATCGAGGTGGACACCGAACTGGGACGGGTGCG
AGGAGCCAATCTGACCTCCAGATTGGGTGTCAACTTTCATGCCTTCCGAG
GCATTCGGTATGCAGAGCCACCTCTGGGAGATTTGCGATTTGTGAATCCG
CAGCCAGTGAAGCCCTGGTCCCCGAAAATCTTCGATGCTAGCGAGGATGG
ACCGATGTGCCCGCAACCGTGGGACAATATGACCGATGTATCTGAGGACT
GTCTGAGACTCAATGTGTATACAAAGGATTTGAAGGGCCGCCGACCTGTG
ATCGTGTTCCTGCATCCCGGCGGATTCTATGTCTTCTCTGGACAGAGTAA
ATATCTAGCAGGACCGGAGCATTTTATGGATCGTGATTGCGTGTTGGTAT
CGCTAAATTATCGGCTGGGTAGTTTGGGATTCCTGGCCACCGGAAGTAAG
GAAGCTCCTGGCAATGCTGGTCTCAAGGATCAAGTCTTGGCTTTGCGCTG
GATCCAGCAGCACATCCAACGTTTTGGCGGTGATCCCGATAGTGTAACCC
TTCTGGGTTACAGTGCGGGAAGTATAAGTGTAGCTCTGCACATGCTATCG
CCCATGTCACGTGGTCTATTCCATCGAGGCATCTGCATGAGTGCTGCTCC
ATACGGACCAGTTAAGTACAAAGACAATGATCTACAACTGGCCAAACGTC
AGGCTGGTTTATTGAAGTGTCCACAGGAATCCA
MXO03770.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:50:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4757-PA | 1653 | CG4757-RA | 1..775 | 9..783 | 3850 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4757-RB | 2098 | CG4757-RB | 23..797 | 9..783 | 3860 | 99.9 | Plus |
| CG4757-RA | 1729 | CG4757-RA | 23..797 | 9..783 | 3860 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11161229..11162003 | 9..783 | 3860 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:40:22 has no hits.
MXO03770.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:50:38 Download gff for
MXO03770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4757-PA | 1..774 | 9..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:09 Download gff for
MXO03770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4757-RA | 15..796 | 1..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:58 Download gff for
MXO03770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4757-RA | 15..796 | 1..782 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:58 Download gff for
MXO03770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11161221..11162002 | 1..782 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:09 Download gff for
MXO03770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6986943..6987724 | 1..782 | 99 | | Plus |
