MXO03777.5prime Sequence
833 bp (672 high quality bases) assembled on 2007-07-18
> MXO03777.5prime
CAGTCGACATGGAAGCGAATGAAAGTGCGATGCCAGGAACGGACAAATCC
CAAGCTTGTCGCACCAGCGGCGATGGCATGGAGCAACCGGAAAACAGTGG
AGCGGCCAAAACAGAGAGCGAAATCCCAGCGAGTGCTGATGTGGACAACA
AGGTAAAGAGGCCACAATTATCGCGAAAAGACAGCTCCGTTGTCCAGGAG
GCCGTCATGGGCAGGAAGACATCAACTAGTAGCGGCCACTCCTCAAATTT
GCCCCTTCCTGGCTTGCATACCCTGTACAGACGACCCGAGAACGTCACCC
GGAGTTTGGCGCCCGTTGTGCCCAAGGGGGAGCTGGTCCAGATGCGGCCA
AGACTGGTCACCAGCGCGGACTCGCTGCCCGAACATAAGAAGACCAAGGC
GCCCAAATTCGTGCCCTACGAACCATATCCGGGTGCCGTGAATCCCATGA
TCTCTGAGCCAACGAATAAACACAAAATCCATCGGGATAAGAACAACCTG
GACATTGCGGTGCTGGTGGATCAGGTGTCCACGCTGCGCACACAGGAATT
GGAGACTGAGACAACGGATATTAAAGAAACAGACACAGCCAGTAGCCATG
AGGTAAACTCACTTAAAGAGGAGCTGGCCAAGATGCGCGATGAACGCAAT
TACTTTCAAGCCCAGTATAAGTTCCAAACGCAGGTGAATAGCGAGCTGAA
GAGCCTGCTGGTGGCCTCCGTGGGCGAGGATCTGCAGACACGGGTTAATC
TCCTCACCGAGGACAAACTACGGCTGGCCAGAGCTCTATTGGACACTGCC
AACAATTTGACCACCCACACCGAGCAGATTGAG
MXO03777.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:51:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9356-PA | 1347 | CG9356-RA | 1..825 | 9..833 | 4100 | 99.8 | Plus |
| CG9356-PB | 1347 | CG9356-RB | 1..825 | 9..833 | 4100 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9356-RB | 1519 | CG9356-RB | 113..937 | 9..833 | 4110 | 99.9 | Plus |
| CG9356-RA | 1578 | CG9356-RA | 172..996 | 9..833 | 4110 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9403215..9404039 | 833..9 | 4110 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:28:17 has no hits.
MXO03777.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:51:12 Download gff for
MXO03777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9356-PB | 1..825 | 9..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:19 Download gff for
MXO03777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9356-RA | 167..996 | 1..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:51 Download gff for
MXO03777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9356-RA | 167..996 | 1..833 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:51 Download gff for
MXO03777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9403215..9404044 | 1..833 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:19 Download gff for
MXO03777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5228937..5229766 | 1..833 | 99 | | Minus |
