MXO03780.5prime Sequence
738 bp (738 high quality bases) assembled on 2007-07-18
> MXO03780.5prime
CAGTCGACATGAGCATTAACTGGATACAGATCACGGAAAGAGCCCGTGAG
GGCATCAAAATCATCAATGCCTTGCCCTACGAGACCTTTACGACGGTTCT
GTTCTACACCCACCGGCAGATGAGTCCCAGCGTAGCATCGGCGAGTGCCA
CCAGTAGTACAGTGGGCACCAGTGTGACGACCACCGGCCGGGTGGACAGC
AGCACCGAGGAGAACCCCACAAGTAACACCGAACCGGAGTACACACTCGA
GGAACTGGAGCGATTGGTGGGCGTACCGCGTCAGGACTTCCTGCTGCTGA
TCAAGACCTTCTCCTACATCCTGCGTCGCATCTCCACGTTTATCATCAAG
CCAAGTTTGCTGCAGCGTGAGCTGCGCGAGAAACTCCAGCTGGAGGATGA
GGCCAAGATCGATGCCATATTGCGTTTGTGGGTGCGCGAAACGACGCCCA
TTATGAACAATTTGGCCAGCAAGCGGTACGAATCAAATGTCATCGAAGAT
GTGGCCTGGAAGCTCAACATGGAGATCTCCTCGCATTGCCAGCAGCGGGA
GAAGACCCCGCTGGCCGTGCTCCAAATGAAAACGGCCGTCGGCGAGGATA
TCAACATCGAAATGACACAACCGGAACTAATGGAACTGTACAATCAGTTC
GAGAGCATCCAGGGCGAACTGGACGCCATGCTGGCCATGAAGACTACAGG
AGCAACGGCGCCTGGCAATCAGGCAAGCTTTCTAGACC
MXO03780.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:51:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2371-PB | 717 | CG2371-RB | 1..714 | 9..722 | 3545 | 99.8 | Plus |
| CG2371-PA | 606 | CG2371-RA | 1..603 | 120..722 | 3015 | 100 | Plus |
| CG2371-PC | 606 | CG2371-RC | 1..603 | 120..722 | 3015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2371-RB | 1155 | CG2371-RB | 118..831 | 9..722 | 3555 | 99.9 | Plus |
| CG2371-RC | 1246 | CG2371-RC | 239..922 | 39..722 | 3420 | 100 | Plus |
| CG2371-RA | 1076 | CG2371-RA | 148..752 | 118..722 | 3025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11677668..11678351 | 722..39 | 3420 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:19:06 has no hits.
MXO03780.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:51:27 Download gff for
MXO03780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2371-PB | 1..717 | 9..723 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:45 Download gff for
MXO03780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2371-RB | 112..831 | 1..722 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:56 Download gff for
MXO03780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2371-RB | 112..831 | 1..722 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:56 Download gff for
MXO03780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11677668..11678349 | 41..722 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:45 Download gff for
MXO03780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11571701..11572382 | 41..722 | 100 | <- | Minus |
