MXO03788.5prime Sequence
496 bp (391 high quality bases) assembled on 2007-07-18
> MXO03788.5prime
CAATCGACATGTCGGGCACCATACTGCCAGAACCTGAGTGGCCGCAAGCT
GTCCATATTGGTGGCCACTTTGCTGCTCTGCCAGGTGTTGTGCTTCCTGC
TGGGCGGTCTGTATGCCCCCCTGCCCGCCGGCCATGTCACCGTGCTGGGA
TCGCTGTGCCGCGAGGATCACGCCCGCCAAAATGACACCAGTTTCCTGCT
GTACTCACGCGGTGCAGGAGCCTGCATCCCAGTGACGCGAGAGGAGGTGG
AGCAGGATTCAACAAAGATGGCCAATGAGTTGGTGCACGTTTTCCAGATG
CCGCTGCCTCGTGACCTGCGCGACCTGCACTACTCCCGTTGGCAGCACAA
TCTGATCGGTGTGCTACAGGTGGAGTTCGGCTATGATTCCTCGTCGGAGC
TAAGGGAACCGCCCAGGGAACTTCAGTTGACAATCAAAATGCGTCTGGCG
TACCGAAATAAGGGGAATCCGGACAACGGCTGGAAGTTGTACGCCC
MXO03788.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:51:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6210-PA | 1785 | MRP-RA | 20..487 | 29..496 | 2190 | 98.7 | Plus |
| CG6210-PB | 1689 | MRP-RB | 20..487 | 29..496 | 2190 | 98.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wls-RB | 2478 | CG6210-RB | 181..667 | 9..496 | 2310 | 98.4 | Plus |
| wls-RA | 2574 | CG6210-RA | 181..667 | 9..496 | 2310 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11168959..11169445 | 496..9 | 2285 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:44:58 has no hits.
MXO03788.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:51:53 Download gff for
MXO03788.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6210-PB | 1..487 | 9..496 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:50 Download gff for
MXO03788.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wls-RA | 173..667 | 1..496 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:54 Download gff for
MXO03788.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wls-RA | 173..667 | 1..496 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:54 Download gff for
MXO03788.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11168959..11169453 | 1..496 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:50 Download gff for
MXO03788.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11162059..11162553 | 1..496 | 97 | | Minus |
