MXO03792.5prime Sequence
864 bp (804 high quality bases) assembled on 2007-07-18
> MXO03792.5prime
CAGTCGACATGTCAAAATTGGACCAGGACCCGAACGCCTCACTGAGCATC
ATGGAGCAAATCAAGCAGCTCATCCGCCCGCCGCCCAACGAGGACGAGAA
GATGATGCAGCGGTCCACCAACACGAAGCATCCGTACTACAGGCGCCCGG
GCAGGGGCCACAACCACGACTATTGTGACGCCTGCGAGGAGGGCGGCAAT
CTGCTGTGCTGCGATCGATGCCCCTCCAGCTTCCACCTGCAATGCCATGA
TCCACCGTTGAGCGAGGAGGACATACCCAGTGGCCAGTGGCTGTGCCACA
GCTGTCGCATGAGCAAGCTCTCCCAGCCGCCGGCCTCCTCATCCAAGGCC
AGTTCCGTGGAGCGTGTGCCTTCGGCGGGCAGTGGCTCACGGGCGAATAC
TCCATCGTCTGGCGATCTGGAGTCCATACCGCTGAAGATCCGCAACCTGC
GCAAACGCAGCAACAGCGAACGCAATAGCACCGAGAAGCTGCTGGCCAAA
ATGCCGATGTCCATACAGCGCGCCCTCGATCCGAACAAGAAGCCAACGCC
GCTGGACGATGTCATCAGGGCGGCCACCATGATGAATCCGCAGCAATTCT
CGCTGCCGCCGGAGCTCGAGCTGCACACCCAGTTCCCGGGCAATGGCAAG
GTGCAACCCGTACAGCAGACGCATCCGCCGAGCGGAAATGGCGGTAATCG
CAGATGCGCCGGCAATCAGCGACGCAACTCCAAGCCGTTTGAGCTGGATG
CCCAGGGACTGGTGCCGCTGCCCGCCAAAACCTGTTTCTACTGCACGCGC
TCCTGCAAACGGGCGCCGCTCATCTCCTGCGACTACTGTCCGCTCTACTT
TCACCAGGATTGCC
MXO03792.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:52:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3815-PA | 2637 | CG3815-RA | 1..856 | 9..864 | 4280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3815-RA | 3232 | CG3815-RA | 118..973 | 9..864 | 4280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6295964..6296580 | 248..864 | 3085 | 100 | Plus |
| X | 23542271 | X | 6295708..6295900 | 55..247 | 965 | 100 | Plus |
| X | 23542271 | X | 6295506..6295553 | 9..56 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:33:39 has no hits.
MXO03792.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:52:03 Download gff for
MXO03792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3815-PA | 1..856 | 9..864 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:32 Download gff for
MXO03792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3815-RA | 118..973 | 9..864 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:38 Download gff for
MXO03792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3815-RA | 118..973 | 9..864 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:38 Download gff for
MXO03792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6295506..6295553 | 9..56 | 100 | -> | Plus |
| X | 6295710..6295900 | 57..247 | 100 | -> | Plus |
| X | 6295964..6296580 | 248..864 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:32 Download gff for
MXO03792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6189539..6189586 | 9..56 | 100 | -> | Plus |
| arm_X | 6189743..6189933 | 57..247 | 100 | -> | Plus |
| arm_X | 6189997..6190613 | 248..864 | 100 | | Plus |
