MXO03795.5prime Sequence
873 bp (814 high quality bases) assembled on 2007-07-18
> MXO03795.5prime
CAGTCGACATGTCCATGCAAAAGGCCAAAGTCATCGACCAGAAGGAGTAC
CTCAAGAAGTACCTATCCGGCGACAAGGAGAAGAAGAAGAAAAAGAAGGA
GAAGAAGCACAAAAAGAATTCGGCCAACACCAAAGTGAAAATCATCGATG
ACGACGCCTACGAAAATGATAATCTGGAAATGGACGAAGATCTACTGCTG
GGCGGCGAGGATGCGCCTCAAATTGTGGGCGAGTACATCGAAGAGGATCC
CAATGTGCGCAGCAAGTGGCGCAACATTGCCGTCAAGGATGAAATCAAAG
AAGAGCACGAGGAATCCTCGCCAGCAACTGGCATTCGCATCAAACAGGAG
CCCTTGGATGAGGAGCAGGAGATGTGGGGACGCAAGGCGACAGTTGTTAA
GGTTAAGGATGAATTCTCACCATCCAGACGAAGTTCACCCGTCAGAATTA
AGCAAGAAAAACGCAGCAGCTCTAGGGATTTAAGCCCAGCGAGATCGAGT
AAGCCAGCAAAGCGAGAAGAGAGTCCTCAAAGGGGGCGAAGAAGGGCGGG
AAGCTCAGATCAGAGTCCCACCAGACGAGGGCGAGATGGCGATCAGTCTC
CGCCACGCCAAAAGCACAGGGATTCCGATCAGAGTCCACCCCGAAAGGCC
AGGAATGGCAATCAATCGCCAGTCAGAAAAAGGCGGGATTCCGACCAAAG
TCCGCCAAGAAAACGAACGGGAAAAGCATCACCCACTCGAAGGAGAAGGG
ATTCCGATCAATCGCCACCCAGACGCCGCAGAAGTAACTCCGATCAGAGT
CCGCCAAGGCGACGTAGAGACAAGGGATTCACTCCGCCCAGAAGGAGGAA
AGATTCCGATCAAAGCCCACCTC
MXO03795.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:52:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13625-PA | 1944 | CG13625-RA | 1..817 | 9..825 | 4085 | 100 | Plus |
| CG13625-PA | 1944 | CG13625-RA | 823..865 | 831..873 | 215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13625-RA | 2094 | CG13625-RA | 81..945 | 9..873 | 4280 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24584216..24585080 | 873..9 | 4265 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:39:22 has no hits.
MXO03795.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:52:17 Download gff for
MXO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-PA | 1..865 | 9..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:41 Download gff for
MXO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 81..945 | 9..873 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:44 Download gff for
MXO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 81..945 | 9..873 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:44 Download gff for
MXO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24584216..24585080 | 9..873 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:41 Download gff for
MXO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20409938..20410802 | 9..873 | 99 | | Minus |
