MXO03810.5prime Sequence
838 bp (822 high quality bases) assembled on 2007-07-18
> MXO03810.5prime
CAGTCGACATGTCCCTGCTGGCCTACGGCGAACCAGCAGAGTCCAGCGAA
ACGGACAGCCCGGCGGCGGAGGCGGAGCCGGACGTACTGGTCGATTTTAC
GGCCATGCTGCAGCGGCAAAGGCAGAACGGCGATTACGGCGGTTGGTTCG
GTTGCGACAGCAAAATGCAGACGACGCAATCCGATCAGGGCTACTATCTC
GAGCAATATGTGCTGGGCGTGCTCGATTTCAGTTCACAGTATGGCATCGA
TTACAGCATCTCGTATACGGCGGCCAATGTGATTGGCAGGCCAACGAAAT
TTCCCGCCTATGGCGATTATCCGGAGACCTTTCCCATGCGCACCTACGGC
GACTGGTGGCAACGGGCACCGTCCGCCACGCGTGAGATTCAGCCCCAGAA
TCTGCCGAAGTTGGAAACACATGACTATGTTGTTGTTTATTTCGAGGAGT
TTGTAGTGCCCACCGAAGTGGCCATCTTTGAGACCTTCAATCCGGGCGCC
GTTGTACGCATTTGGGCGTACGGCCTGACCAAAAACTGGACCTGCCTGTG
GGAGGCAACGGAAAGCGATCTCTCCCGACCGCCGCCACTGGACTCGCGTC
GCTTTGCGCCGTCACTGAAGAAGACCACGATGCTAACGAAAACGCTGCGC
ATCGATTTCAATCACAGCCGACTCAATTACTATACGGAAATCGATGCCAT
TATGCTGTGCGGTCGAACGGTCACCAAAACGCAAAACCTACTGGCCAAGC
AGCAAATTACGCAGCACAGCCGGACGCTAGTGTCGCCGCCACCGGATGCT
ATTGGCTCAACGTCCGGCGACGGCAGTGGCGGATCAAT
MXO03810.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:52:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1839-PA | 2010 | CG1839-RA | 1..830 | 9..838 | 4150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:49:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbxl4-RA | 2894 | CG1839-RA | 600..1430 | 8..838 | 4155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:49:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14236994..14237324 | 338..8 | 1655 | 100 | Minus |
| X | 23542271 | X | 14236507..14236715 | 640..432 | 1045 | 100 | Minus |
| X | 23542271 | X | 14236244..14236441 | 838..641 | 990 | 100 | Minus |
| X | 23542271 | X | 14236846..14236940 | 432..338 | 475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:49:50 has no hits.
MXO03810.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:52:59 Download gff for
MXO03810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1839-PA | 1..830 | 9..838 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:13 Download gff for
MXO03810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbxl4-RA | 593..1430 | 1..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:41:39 Download gff for
MXO03810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbxl4-RA | 593..1430 | 1..838 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:41:39 Download gff for
MXO03810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14236244..14236441 | 641..838 | 100 | <- | Minus |
| X | 14236507..14236714 | 433..640 | 100 | <- | Minus |
| X | 14236846..14236939 | 339..432 | 100 | <- | Minus |
| X | 14236994..14237329 | 1..338 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:13 Download gff for
MXO03810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14130277..14130474 | 641..838 | 100 | <- | Minus |
| arm_X | 14130540..14130747 | 433..640 | 100 | <- | Minus |
| arm_X | 14130879..14130972 | 339..432 | 100 | <- | Minus |
| arm_X | 14131027..14131362 | 1..338 | 98 | | Minus |
