MXO03813.5prime Sequence
864 bp (847 high quality bases) assembled on 2007-07-18
> MXO03813.5prime
CAGTCGACATGGCCATAGACCTCCTGATCCTGGCCCTGCTGCTCGTCTCG
TTCCTGATCAACCTGCTGGCGCTGTGTGCCTTTTGGATAACGCCTGGCTT
GAGGACCACCGCCAATCGCTTTACGATCAACCTGCTGGCCATCAATCTCA
TTGGTTGCTGCATCTTGGCCCCCACTTTGTTCCTGGGACTGCCGGGAAAG
TCTGCGGAGGCATCCACTTCCAACGCCGAGACCCTGGAGTTCTTCTCGAA
GCCGGGAAACCATCAGGTGATACTTCGTCGCAATGGCCAGCTGGTGGAAC
AGGACGGCGTGGTGGTGCGAAGGAACATCAGCGAAAACGGCGATACGGTG
GAGACCTTCTTCAAGTGCAATGCCACCTACTGTCGCGAGTTGACCATCGA
TGAGCGCGGAGATGGTGGCTTTGTCATCACGGAAACCGAGACACACGAAG
AGAATCTCTCGGCCTTTGAGAGCTTACCCACGGAGGCTCCCATTTTGCCG
CCCGTCCAACTGAGATGTTGGTCCATAGACATGACTGCTGCGCTGGGAGC
TCTGGCAGTACTGCTCGTGGTGGGGGACACCTGGTGTGCCGTTACGGATC
CCCTGCGCTACCACAGTCGCATTTCGGGCGTGAAAACCTGGATCTTCATA
GCACTCACCTGGGTGGTGGGCATACTCTTTGGAGCCCTTTCCGCCTTCCG
AGTTTTGGACTTTGAGGCGGACGCCCTGTTCAGCAGACAACGCCGCCTGG
CAGTCACGTACTTCAACATCAGCAGCACCAATAGTATTTTCGGAGTGGTG
TACGCCAGTGTCTACTTCATCGTGATCATCCTCCTGCCCTTCGGCTTCGT
GTGCGGGATGTACT
MXO03813.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:53:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12290-PA | 2397 | CG12290-RA | 1..856 | 9..864 | 4255 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12290-RB | 4453 | CG12290-RB | 458..1313 | 9..864 | 4265 | 99.9 | Plus |
| CG12290-RA | 3082 | CG12290-RA | 458..1313 | 9..864 | 4265 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26230705..26231560 | 9..864 | 4265 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:32:17 has no hits.
MXO03813.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:53:13 Download gff for
MXO03813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12290-PA | 1..856 | 9..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:29 Download gff for
MXO03813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12290-RA | 456..1313 | 6..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:18 Download gff for
MXO03813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12290-RA | 456..1313 | 6..864 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:18 Download gff for
MXO03813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26230703..26231560 | 6..864 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:29 Download gff for
MXO03813.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22056425..22057282 | 6..864 | 99 | | Plus |
