MXO03828.5prime Sequence
833 bp (799 high quality bases) assembled on 2007-07-18
> MXO03828.5prime
CAGTCGACATGGGAACCTTGGGCAATCAGTTCATCCTCTCGCGGGAGCGT
CGCCGGTTCGGGAGGCAGTGCCTCTTCACAGACCGCAACGAGATGATCCT
CAGTGTGCAGCCGAGTGGACGGTTGCGCCTCAAGTACATACTGCGCAATC
CGATCAACGAACGGACCCAGCTGAGCGAACAGTATGCAGCATCTTCAGTG
TTGACACACAACGTGACCCTGGATTCCCATGGCTTGAATCACTACGAAGG
CGGCTGGAACGTCAAGGAGGTGAACATTATGGACGAGGAGTCCACAATGC
GCTATCGCAAAAAAGTCGAGCGTGATGACTCCTGGGGCATCGAGGTGAAC
CAATTGATGCACGCCGCAATGGACATCAGTTCGGCCAACAATGCTGTCAA
CATCTACGAGGACTTCTTTGTGGATCTACCGGAGGATTTGGGCCGCGGCA
TCAGCATGAAGATCGCTGCCAGGGGTACCCATGTCTTTCATGATCTGTGG
ATCCCATCGCGTAGGCTGATGACGTGCGAATGGCTAAACAACGATCCCAA
TCAGTTTCTCCTGTTCTATTCCAAATCGAATGAGCCTGACACCGCGACTA
CACAAAACAGCTAAACACGCTGCCCGATTTTGGCAACGATAATCCGCATG
CATTCTACATTTGGAACTTGGATGATGCCACCCGACCGGCTGCCCATTAC
GATTCTAGGAGAGTCGTACGGGTTGCCAAGGTGTGCCTGCGGGATGAGAG
CTACATGGTGGGTGGACTACAGGAGGGTCAGGTCGGCTTCTGGCTAACCG
AGAACAGGGTGGTCCCAAGAGCATGTGTCCCCT
MXO03828.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:54:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10859-PA | 1884 | CG10859-RA | 1..566 | 9..574 | 2830 | 100 | Plus |
CG10859-PA | 1884 | CG10859-RA | 586..795 | 596..805 | 1050 | 100 | Plus |
CG10859-PA | 1884 | CG10859-RA | 796..824 | 805..833 | 145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:45:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG10859-RB | 1989 | CG10859-RB | 24..847 | 9..833 | 4055 | 99.6 | Plus |
CG10859-RA | 2209 | CG10859-RA | 244..1067 | 9..833 | 4055 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:45:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13397598..13398421 | 833..9 | 3980 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:45:29 has no hits.
MXO03828.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:54:08 Download gff for
MXO03828.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10859-PA | 1..824 | 9..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:12 Download gff for
MXO03828.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10859-RA | 244..1067 | 9..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:07 Download gff for
MXO03828.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10859-RA | 244..1067 | 9..833 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:07 Download gff for
MXO03828.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13397598..13398421 | 9..833 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:12 Download gff for
MXO03828.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13397598..13398421 | 9..833 | 99 | | Minus |