MXO03862.5prime Sequence
899 bp (738 high quality bases) assembled on 2007-07-18
> MXO03862.5prime
CAGTCGACATGGCCGCTGAGGAGACGGCGCTAACCGGCGTCGGCGAGCTA
CTATTCTCGCTGCTAATTGGATACCTAGGTGCCCTGGAATTCGCCTTTGT
GGCGCGCCATCTATACCACTGGACTTTCCAACATCCCGGCGATTCTTCTG
TAGATGCAGCAGCTGACGCAGAAGAATTGCCTCGCATGCGAGAGCGATTG
GATAAGCAGATCAAGGAGGCGGCGGAAAGGGAAGCCCTGGCAGGAACCAA
TGTCATGCAGGATGGTGTCCTATATGTCAATGGAATACGAGTAGATCCTG
CTGGAGATAAAAGACAAGCTTTGGCAGCCGAACTGGCACGTCAACAGCAA
ATTGAAGCCGATACGAGGCGTCAGCTGGCCGAAGCCGAGGCCAAGCTGGT
AGAAGAAAGACTACGAGTCCAGAGGGAGAAAGAGGAATCGGAGGAGCAGC
AGAGAAAGCTCGTAGAGGCGGAAAGACAGCGCGAAAGAGAGCAGGCGGAG
AAAGAACTGCAGGAACAAAGAGAAGCCGAACGCAGACAGCTAGAAGCAGA
AGAAAATCAGCGTAAACAGCGCGAAAACGAGGAGAAAGAACGCCTAGAAA
ACGAAAGAAGGCTGATAGATGCCGAACGGGAAAGGGAGGAGAATGAGCGA
AGACTGCAAGAAGCTGAAGAGCAGCGCGAGCGAGAAGAAAGCGAAAGAAG
AATCGTCGTGGCAGAGCGTCAGAGAGAGCAGGCCGAAGCCGAAAAGGAGC
GAGCCGAACAACAAAGGATCCTGGCTGAAGCCGAGGCAGCGCAAGCCGAG
CGTCGTCTCTTTGATGCCGAGATTCAGCGAGAGCGCGATCAAGCTGACGA
AGAAGGGGCAGCACTGAGGGATGCGGAAATCGTAGAGCGTCTTCTGGCA
MXO03862.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:56:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11915-PA | 2085 | CG11915-RA | 1..891 | 9..899 | 4380 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Lmpt-RL | 3051 | CG42679-RL | 639..1529 | 9..899 | 4410 | 99.7 | Plus |
| Lmpt-RK | 7424 | CG42679-RK | 639..1529 | 9..899 | 4410 | 99.7 | Plus |
| Lmpt-RJ | 4501 | CG42679-RJ | 639..1529 | 9..899 | 4410 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16900053..16900943 | 9..899 | 4410 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:53 has no hits.
MXO03862.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:56:12 Download gff for
MXO03862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11915-PA | 1..890 | 9..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:26:29 Download gff for
MXO03862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lmpt-RJ | 630..1528 | 1..898 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:39 Download gff for
MXO03862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Lmpt-RJ | 630..1528 | 1..898 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:39 Download gff for
MXO03862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16900044..16900942 | 1..898 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:26:29 Download gff for
MXO03862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16893144..16894042 | 1..898 | 99 | | Plus |
