MXO03863.5prime Sequence
853 bp (790 high quality bases) assembled on 2007-07-18
> MXO03863.5prime
CAGTCGACATGTACGTCCGGAATTGTCTGCCGTTCCTCTGCAGCTATTTG
CTGATCTCATTGGCGGCCACAGCTACTACGGATGAGGACGCGGATGCTGA
TGTGGATAGTGGCTCATCCCGAATAGTGCTGGTCTCCAGCTTGGAAGGTC
ATTGCCAGACGGAGGGCAAGGTGACCAGCTGCAGGGGCTTTGAGTTTGCG
GGAGAGGACGAGAAGGCCACCTTTGATCTGCCAACGGAGGTGCGGATTGC
CGAGGATGGCACCACCTACGAAGTGGGCGATGAGGAGCACTCGCGAACCC
TGATCTTCGAGAACTGCACCTTCACCAATTTTCCCCTGCGCTTATTTTAC
ACACTAGAGGTCAGTGAGCTGGACATGCGCGGCTGTGGCATCCGCTTCAT
TTACTGGGAGAACTTCTCCATTGGTGCGGATAAGCTGGTGATTCTTCTGC
TCAGCGATAATCACATCGAAGTGCTGCCCACGAAAACCTTCAGGGGAGCA
GGAAACTTGGAGTTTATCTTCCTGAATCGCAACAAACTAGGCAAACTGCA
GGCGGGTGCGTTTGATAATCTCCTGAAATTACAGTACCTGGATCTCACAG
AGAATCGCCTGGAGGCTTTAGCCGCGGACGTATTTGCCGGACTGAAGAGT
CTGCGGCACGTGGGACTGGCCGGTAATCAACTGACCACCATTGAGAGCGA
TTTATTTGCCCACAATCCGGACCTTTTGTCGGTCGCAATGCAGAACAATC
GACTGCGAGAGGTGGGCGAGTATGCCTTTCGATCCCGCGGACGACACCAT
CAGATGCAGTATGTGGATCTATCGAATAACCCCGAGCTGGTCGTTCTACT
GCT
MXO03863.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:56:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10824-PA | 1665 | CG10824-RA | 1..845 | 9..853 | 4225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10824-RA | 1855 | CG10824-RA | 39..883 | 9..853 | 4225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21160210..21161054 | 853..9 | 4225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:39:40 has no hits.
MXO03863.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:56:17 Download gff for
MXO03863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10824-PA | 1..845 | 9..853 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:48 Download gff for
MXO03863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10824-RA | 31..883 | 1..853 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:55 Download gff for
MXO03863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10824-RA | 31..883 | 1..853 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:55 Download gff for
MXO03863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21160210..21161060 | 1..853 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:48 Download gff for
MXO03863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16985932..16986782 | 1..853 | 99 | | Minus |
