MXO03872.5prime Sequence
893 bp (765 high quality bases) assembled on 2007-07-18
> MXO03872.5prime
CAGTCGACATGCTTAAGCTGGGACTCGCGGTCCCCACTCGATGGTCCTTC
AGATGTCGTCGCCTTGGTGGAATGGCTATCATTAAAGGCGAGACAAAAAT
CTCCGTGGACAAGCAGAAAGCAGTCCAGCCGGAACAGGATGAGGACCAAC
AAGAGGTCGAGCCGGATTCCCAGCCGGCGGAAGAAAATCCAAGTATTCAC
AGGAACCAGAGAGTATTAGTTAATCATGCCATTCAGGAGATTCAGCACAG
GCCGTTGGAGGTGCCCACAATTATCGGCGATGATACAGTGTACACCATGG
ACACTCAGCGTGTTTGCTGCCCGCATCACCTGCAGACGAACTTGGCTCAC
GTCTACTACGCCAATCGCAAGCAAATCGAGGCGGCAATTAAGTCTGCTCT
TTCGGCGCAAGGAACTTGGAGTCTAGTTCCCATCGCCCAGCGACTGGCCA
TTTGGCGACGTGCCGCCACCATTATCGAGGAGGACGAGCTGCGGCTGAGA
GTGTTCCTCATGATGACGCTGAGCAAAACCGCCGACGATGCGACGCGGGA
CATTCGGCGGCTACTCACATCGCTGAGGGCCAATGCTGACTATTTGGAGC
ATCTGTCCGAGCTGCGCTTTGAGATCCAGGGTGATATGAATGTATTCCCC
AGCTTTCATTTGCGACCCATGGATGGATTTGTGGCCGCACTGGCACCATT
TGAATCGGTGGCCTTGTCATCCAGCTTGGCCCTCTGTCCGGCGCTCATGG
GCAACACGGTGTTGTGGAATCCCTCATTGGAAGTGGCACCAGTGAGCTAT
TTTATTTTCAGAGCCTTCCAGGAGGCGGGTTTGCCCAGCGGCGTTATCAA
CTTTGTGCCGGCCAACGAGCGTCTGTTCTTGGACACCATCACG
MXO03872.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:57:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6661-PA | 1746 | CG6661-RA | 1..885 | 9..893 | 4400 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6661-RA | 1976 | CG6661-RA | 150..1034 | 9..893 | 4410 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14034925..14035809 | 9..893 | 4410 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:59:41 has no hits.
MXO03872.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:57:04 Download gff for
MXO03872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-PA | 1..885 | 9..893 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:28 Download gff for
MXO03872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 144..1034 | 1..893 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:20 Download gff for
MXO03872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6661-RA | 144..1034 | 1..893 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:20 Download gff for
MXO03872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14034919..14035809 | 1..893 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:28 Download gff for
MXO03872.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14028019..14028909 | 1..893 | 99 | | Plus |
