MXO03879.5prime Sequence
846 bp (825 high quality bases) assembled on 2007-07-18
> MXO03879.5prime
CAGTCGACATGAGTGCCAAGAGCAGGAGACCTGGCACCGGCAGCAGCCAG
ACGCCAAACGAGTGCGTCCAGGTGGTGGTCCGATGCAGGCCCATGAGCAA
CAGAGAACGCTCGGAAAGATCGCCGGAGGTGGTCAACGTGTATCCGAATC
GAGGCGTTGTGGAGCTGCAGAATGTGGTCGATGGCAATAAGGAGCAGCGC
AAGGTTTTCACCTACGATGCCGCCTATGATGCGAGTGCAACGCAGACGAC
GCTCTACCATGAAGTGGTCTTTCCCCTAGTCAGTTCCGTTTTGGAGGGAT
TCAACGGATGTATATTTGCCTATGGACAAACGGGCACTGGTAAAACCTTC
ACAATGGAGGGAGTACGCGGAAATGACGAACTGATGGGCATAATACCGCG
CACATTCGAACAGATCTGGCTGCACATTAATCGCACCGAGAATTTCCAGT
TTCTGGTCGATGTATCCTACCTAGAGATTTATATGGAGGAGCTGCGCGAT
CTGCTAAAGCCCAACTCTAAGCATTTGGAGGTGCGGGAACGTGGATCGGG
CGTTTATGTGCCCAATCTGCACGCCATTAACTGCAAGAGTGTCGAAGATA
TGATCAAAGTGATGCAGGTGGGCAACAAGAACCGCACAGTGGGATTCACC
AACATGAATGAGCATAGTTCAAGATCCCACGCCATTTTCATGATCAAAAT
CGAGATGTGCGATACGGAAACGAACACCATCAAAGTGGGCAAACTGAATC
TCATCGATTTGGCGGGCAGTGAGCGGCAGTCCAAGACAGGAGCATCAGCG
GAGCGGCTAAAGGAAGCCAGCAAGATTAATCTGGCACTCTCGTCGC
MXO03879.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:57:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7293-PA | 2355 | Klp68D-RA | 1..838 | 9..846 | 4190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp68D-RB | 2971 | CG7293-RB | 158..995 | 9..846 | 4190 | 100 | Plus |
| Klp68D-RA | 2998 | CG7293-RA | 185..1022 | 9..846 | 4190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11795957..11796621 | 9..673 | 3325 | 100 | Plus |
| 3L | 28110227 | 3L | 11796725..11796899 | 672..846 | 875 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:24:16 has no hits.
MXO03879.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:57:34 Download gff for
MXO03879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7293-PA | 1..838 | 9..846 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:08 Download gff for
MXO03879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 182..1022 | 6..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:32 Download gff for
MXO03879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp68D-RA | 182..1022 | 6..846 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:32 Download gff for
MXO03879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11795954..11796621 | 6..673 | 99 | -> | Plus |
| 3L | 11796727..11796899 | 674..846 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:08 Download gff for
MXO03879.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11789054..11789721 | 6..673 | 99 | -> | Plus |
| arm_3L | 11789827..11789999 | 674..846 | 100 | | Plus |
